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Mutant Information

Variant Information

Single base substitutions: 50

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	18738269	A-C	HET	LOC_Os01g34040
SBS	Chr1	23131929	C-T	HET
SBS	Chr1	28566540	A-T	HET
SBS	Chr1	39155481	G-A	HET
SBS	Chr1	40685653	T-A	HOMO
SBS	Chr10	15866976	G-T	HET
SBS	Chr10	16133055	A-G	HET
SBS	Chr10	18401246	T-C	HOMO
SBS	Chr10	4357610	C-T	HET
SBS	Chr10	5486005	T-A	HET
SBS	Chr10	6498771	G-A	HET
SBS	Chr11	15914364	C-T	HET
SBS	Chr11	15914377	C-T	HET
SBS	Chr11	15914379	A-T	HET
SBS	Chr11	22996069	A-T	HET
SBS	Chr11	26901208	G-A	HET
SBS	Chr12	14554936	G-A	HOMO
SBS	Chr12	19509480	G-T	HET
SBS	Chr12	8504887	C-T	HOMO
SBS	Chr12	8954890	G-T	HOMO
SBS	Chr2	13846450	T-C	HET	LOC_Os02g23890
SBS	Chr2	18948562	C-T	HET
SBS	Chr2	21797618	A-G	HET
SBS	Chr2	2322539	T-G	HET
SBS	Chr3	24984753	G-C	HET
SBS	Chr4	10792584	C-T	HOMO
SBS	Chr4	12122074	C-T	HOMO
SBS	Chr4	12486609	G-A	HET
SBS	Chr4	14322545	T-C	HET
SBS	Chr4	27031522	T-A	HOMO
SBS	Chr5	11937331	C-T	HOMO	LOC_Os05g20360
SBS	Chr5	12114439	C-G	HET
SBS	Chr5	12406609	C-T	HET
SBS	Chr5	19625902	G-A	HET
SBS	Chr5	20829050	T-C	HET
SBS	Chr5	24325794	A-T	HET
SBS	Chr5	24746089	G-A	HET	LOC_Os05g42310
SBS	Chr6	1401606	A-G	HET
SBS	Chr6	6749837	G-A	HET	LOC_Os06g12450
SBS	Chr6	6749838	G-A	HET
SBS	Chr7	12736161	G-A	HET
SBS	Chr7	14026266	C-T	HOMO
SBS	Chr7	15971926	T-C	HET
SBS	Chr8	11012988	C-T	HOMO
SBS	Chr8	13624316	A-C	HET
SBS	Chr8	16870322	C-T	HET
SBS	Chr8	19286772	G-A	HOMO
SBS	Chr9	137552	G-A	HOMO
SBS	Chr9	6547438	T-C	HET
SBS	Chr9	7050486	T-C	HOMO

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1239216	1239217	2
Deletion	Chr3	1826291	1826301	11
Deletion	Chr2	4278001	4331000	53000	8
Deletion	Chr1	4555197	4555197	1
Deletion	Chr5	4961467	4961467	1
Deletion	Chr8	5022306	5022315	10
Deletion	Chr2	6129404	6129404	1
Deletion	Chr8	7859482	7859491	10
Deletion	Chr10	8646076	8646076	1
Deletion	Chr8	13170749	13170751	3	LOC_Os08g21970
Deletion	Chr9	14339779	14339779	1
Deletion	Chr8	15228792	15228834	43
Deletion	Chr10	19880077	19880077	1
Deletion	Chr7	20142607	20142607	1
Deletion	Chr4	20574010	20574010	1
Deletion	Chr4	20748498	20748498	1
Deletion	Chr9	20914322	20914322	1
Deletion	Chr8	21734592	21734593	2
Deletion	Chr2	23843011	23843012	2
Deletion	Chr3	26886996	26886999	4
Deletion	Chr1	27250414	27250415	2
Deletion	Chr1	28916661	28916673	13
Deletion	Chr3	32058993	32058999	7

Insertions: 23

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	33225155	33225155	1
Insertion	Chr10	8752631	8752631	1
Insertion	Chr11	27968595	27968595	1
Insertion	Chr2	13340502	13340523	22
Insertion	Chr3	4528453	4528551	99
Insertion	Chr3	5468448	5468448	1
Insertion	Chr3	986717	986717	1
Insertion	Chr4	10664492	10664492	1
Insertion	Chr4	18330057	18330064	8
Insertion	Chr4	8411775	8411775	1
Insertion	Chr4	8684439	8684439	1
Insertion	Chr5	11780903	11780903	1
Insertion	Chr5	21261776	21261776	1
Insertion	Chr5	2567681	2567682	2
Insertion	Chr5	29375624	29375624	1
Insertion	Chr5	7779764	7779764	1
Insertion	Chr6	19955894	19955894	1
Insertion	Chr6	22905916	22905917	2
Insertion	Chr8	24212688	24212688	1
Insertion	Chr8	2455137	2455140	4
Insertion	Chr8	5097551	5097551	1
Insertion	Chr8	5200840	5200842	3
Insertion	Chr9	569194	569194	1

Inversions: 10

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	6581279	7340131
Inversion	Chr9	7288194	7313259
Inversion	Chr9	7313248	8221988
Inversion	Chr2	8610636	8930005	LOC_Os02g15400
Inversion	Chr2	8610661	8930020	LOC_Os02g15400
Inversion	Chr2	12564802	12764395
Inversion	Chr2	12564809	12764411
Inversion	Chr8	20565261	20565380
Inversion	Chr5	21228788	21228874
Inversion	Chr4	35371503	35371655

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	22287464	Chr6	30907258	2
Translocation	Chr9	22287496	Chr6	30907244	2

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