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Mutant Information

Variant Information

Single base substitutions: 44

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	2084040	C-T	HET
SBS	Chr1	38039738	A-G	HET
SBS	Chr1	42102183	C-T	HET
SBS	Chr10	19973271	G-A	HET
SBS	Chr10	3788314	A-G	HOMO
SBS	Chr10	46315	G-T	HET
SBS	Chr10	7350933	C-T	HOMO
SBS	Chr10	7972683	T-A	HET
SBS	Chr11	17292262	T-A	HET	LOC_Os11g29790
SBS	Chr11	27230675	G-A	HET
SBS	Chr11	3563877	G-A	HET	LOC_Os11g07150
SBS	Chr12	15114081	T-C	HET
SBS	Chr12	3104993	G-A	HET
SBS	Chr2	19524884	A-G	HET
SBS	Chr2	3702563	T-A	HET
SBS	Chr3	26644315	G-A	HET
SBS	Chr3	29165918	C-T	HET
SBS	Chr3	30292436	G-A	HET
SBS	Chr4	13079747	C-T	HET
SBS	Chr4	26111567	G-A	HET
SBS	Chr4	31584485	G-A	HET
SBS	Chr4	31901385	C-T	HET	LOC_Os04g53540
SBS	Chr4	32485714	G-T	HOMO
SBS	Chr4	33324882	T-A	HET
SBS	Chr4	34223552	T-C	HET
SBS	Chr5	18269783	G-A	HET
SBS	Chr5	28510500	G-T	HOMO
SBS	Chr5	3122797	G-A	HET	LOC_Os05g06200
SBS	Chr6	15097031	A-G	HET
SBS	Chr6	25062507	C-T	HET
SBS	Chr6	2711453	G-A	HET	LOC_Os06g05920
SBS	Chr6	7082611	T-C	HET
SBS	Chr7	12846118	A-G	HOMO
SBS	Chr7	25464062	G-A	HET
SBS	Chr8	16860977	T-C	HET
SBS	Chr8	3860091	C-T	HET
SBS	Chr8	415886	C-G	HET
SBS	Chr8	5136711	A-G	HET
SBS	Chr9	11203953	G-A	HOMO	LOC_Os09g18250
SBS	Chr9	15530549	T-C	HOMO
SBS	Chr9	22254353	C-G	HOMO
SBS	Chr9	8374613	C-T	HOMO
SBS	Chr9	9319068	T-C	HOMO
SBS	Chr9	941497	C-G	HOMO

Deletions: 33

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	243070	243071	2	LOC_Os07g01390
Deletion	Chr7	1260723	1261133	411
Deletion	Chr1	2187967	2187967	1	LOC_Os01g04780
Deletion	Chr2	2225293	2225303	11
Deletion	Chr4	3365716	3365716	1
Deletion	Chr6	3815426	3815426	1
Deletion	Chr5	3906987	3906988	2
Deletion	Chr1	6988970	6988970	1
Deletion	Chr4	7532229	7532230	2	LOC_Os04g13510
Deletion	Chr1	8316543	8316548	6
Deletion	Chr6	8536018	8536018	1
Deletion	Chr2	8567501	8567501	1	LOC_Os02g15320
Deletion	Chr10	8584110	8584376	267
Deletion	Chr9	9334640	9334642	3	LOC_Os09g15300
Deletion	Chr12	9612865	9612875	11
Deletion	Chr12	9978561	9978704	144
Deletion	Chr9	10879105	10879108	4
Deletion	Chr9	11649525	11649567	43
Deletion	Chr11	12097975	12097977	3
Deletion	Chr11	13237231	13237256	26
Deletion	Chr2	13705399	13705553	155
Deletion	Chr1	14672426	14672426	1
Deletion	Chr10	15249197	15249275	79
Deletion	Chr1	15848786	15848786	1
Deletion	Chr6	15988354	15988355	2
Deletion	Chr3	16033765	16033766	2
Deletion	Chr12	20570451	20570460	10
Deletion	Chr2	21836679	21836679	1
Deletion	Chr8	22474645	22474678	34
Deletion	Chr2	22797259	22797281	23
Deletion	Chr5	24127542	24127543	2
Deletion	Chr5	28223010	28223010	1
Deletion	Chr1	42427852	42427852	1

Insertions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	12479643	12479644	2
Insertion	Chr1	16763248	16763250	3	LOC_Os01g29900
Insertion	Chr10	8752996	8752996	1
Insertion	Chr11	2958143	2958143	1
Insertion	Chr12	6821750	6821788	39
Insertion	Chr2	9360439	9360443	5
Insertion	Chr4	5581395	5581434	40
Insertion	Chr5	13166757	13166757	1	LOC_Os05g23090
Insertion	Chr6	11662289	11662329	41
Insertion	Chr7	19872782	19872782	1
Insertion	Chr8	16171416	16171416	1
Insertion	Chr8	18634007	18634007	1
Insertion	Chr8	2083191	2083254	64
Insertion	Chr8	6527256	6527258	3
Insertion	Chr9	5495803	5495804	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	7336601	7336752
Inversion	Chr9	10877946	11255109	2
Inversion	Chr9	10877954	11255114	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	13746600	Chr6	19186290
Translocation	Chr4	29626136	Chr2	35571986

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