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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr10	20388630	C-T	HET
SBS	Chr10	21616584	C-A	HOMO
SBS	Chr10	7572336	C-T	HET
SBS	Chr10	9980261	G-T	HET
SBS	Chr11	490868	G-A	HET	LOC_Os11g01910
SBS	Chr11	7492302	A-G	HET
SBS	Chr11	8172876	G-C	HET
SBS	Chr11	8768139	T-G	HET
SBS	Chr12	12633255	C-G	HET	LOC_Os12g22370
SBS	Chr12	27518563	C-A	HET
SBS	Chr2	2834143	G-A	HOMO
SBS	Chr2	5887586	A-T	HET
SBS	Chr3	21541500	G-C	HOMO
SBS	Chr3	5770771	T-A	HET
SBS	Chr3	6194339	G-A	HET
SBS	Chr3	8653670	G-A	HET
SBS	Chr4	17889355	T-C	HET
SBS	Chr4	19748136	C-T	HET
SBS	Chr4	9959742	C-T	HET
SBS	Chr5	28463261	A-G	HET
SBS	Chr5	28464334	G-A	HET	LOC_Os05g49610
SBS	Chr5	29340779	T-A	HET
SBS	Chr5	7350691	A-T	HET
SBS	Chr6	14379851	C-G	HET
SBS	Chr6	4908570	C-T	HET	LOC_Os06g09650
SBS	Chr6	6730349	T-C	HET
SBS	Chr6	8676264	C-T	HOMO
SBS	Chr7	5220563	G-T	HET	LOC_Os07g09814
SBS	Chr9	11038410	T-A	HOMO
SBS	Chr9	19143592	G-A	HET
SBS	Chr9	3315387	T-C	HOMO
SBS	Chr9	3386795	A-G	HET

Deletions: 39

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	1958095	1958105	11
Deletion	Chr2	2112382	2112382	1
Deletion	Chr2	2707908	2707978	71
Deletion	Chr1	2906206	2906206	1
Deletion	Chr9	3259007	3259009	3
Deletion	Chr4	3362036	3362037	2
Deletion	Chr9	4817289	4817292	4
Deletion	Chr10	5885984	5885984	1
Deletion	Chr7	6159345	6159345	1
Deletion	Chr10	7670475	7670475	1	LOC_Os10g14130
Deletion	Chr2	9373821	9373822	2
Deletion	Chr10	10035146	10035146	1	LOC_Os10g20000
Deletion	Chr4	10367926	10367936	11
Deletion	Chr7	10607229	10607229	1
Deletion	Chr10	10657001	10708000	51000	6
Deletion	Chr1	11328947	11328948	2
Deletion	Chr1	12008583	12008583	1
Deletion	Chr8	12135739	12135739	1	LOC_Os08g20220
Deletion	Chr7	12938685	12938686	2	LOC_Os07g22960
Deletion	Chr10	14078514	14078514	1
Deletion	Chr5	14281081	14281083	3
Deletion	Chr7	15122779	15122779	1
Deletion	Chr12	15685812	15685812	1
Deletion	Chr3	15919503	15919519	17
Deletion	Chr1	16059001	16092000	33000	6
Deletion	Chr7	16701214	16701214	1	LOC_Os07g28540
Deletion	Chr3	17035209	17035209	1	LOC_Os03g29900
Deletion	Chr4	17185927	17185929	3	LOC_Os04g29000
Deletion	Chr12	18795655	18795655	1
Deletion	Chr7	19146778	19146781	4
Deletion	Chr1	19586970	19586970	1
Deletion	Chr12	20167328	20167336	9	LOC_Os12g33340
Deletion	Chr8	20652001	20754000	102000	11
Deletion	Chr3	23305307	23305316	10
Deletion	Chr12	24404957	24404957	1
Deletion	Chr5	24469148	24469154	7
Deletion	Chr7	27254304	27254355	52
Deletion	Chr2	30406424	30406425	2
Deletion	Chr3	32353910	32353917	8

Insertions: 38

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	10348131	10348133	3
Insertion	Chr1	2797494	2797610	117
Insertion	Chr10	12205867	12205881	15
Insertion	Chr10	8743711	8743711	1
Insertion	Chr11	15041268	15041269	2
Insertion	Chr11	3199331	3199351	21
Insertion	Chr11	5292125	5292126	2
Insertion	Chr11	7769798	7769923	126
Insertion	Chr12	4834254	4834255	2
Insertion	Chr2	23806561	23806561	1
Insertion	Chr3	24130566	24130569	4
Insertion	Chr4	21574098	21574098	1
Insertion	Chr4	25560455	25560455	1
Insertion	Chr4	25622967	25622967	1
Insertion	Chr4	2574972	2574972	1
Insertion	Chr4	2642097	2642097	1	LOC_Os04g05310
Insertion	Chr5	10740053	10740053	1
Insertion	Chr5	13804850	13804850	1
Insertion	Chr5	4919066	4919066	1
Insertion	Chr5	7161335	7161445	111
Insertion	Chr5	8259516	8259516	1
Insertion	Chr5	8994340	8994341	2
Insertion	Chr5	9511255	9511255	1
Insertion	Chr6	14476890	14476890	1
Insertion	Chr6	16047129	16047197	69
Insertion	Chr6	22027772	22027772	1
Insertion	Chr6	22189039	22189115	77
Insertion	Chr6	8597376	8597376	1
Insertion	Chr7	17138134	17138139	6
Insertion	Chr8	13248865	13248865	1
Insertion	Chr8	17515866	17515869	4
Insertion	Chr8	22509329	22509329	1
Insertion	Chr8	3813947	3813947	1
Insertion	Chr8	6527446	6527446	1
Insertion	Chr8	6635932	6635932	1
Insertion	Chr8	8338988	8339072	85
Insertion	Chr9	17742976	17742976	1
Insertion	Chr9	20211380	20211502	123

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	887747	1606310	LOC_Os02g02490
Inversion	Chr1	15592596	16058627
Inversion	Chr1	15592622	16091819	LOC_Os01g28740
Inversion	Chr12	16414133	16414379

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	5747361	Chr5	13127960	2
Translocation	Chr10	7831329	Chr2	17726625	2
Translocation	Chr10	20388400	Chr3	18245634
Translocation	Chr10	20389456	Chr3	18245638
Translocation	Chr9	22297011	Chr1	30728475
Translocation	Chr9	22544413	Chr1	30727200	LOC_Os09g39240

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