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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	19608954	G-C	HET
SBS	Chr2	28068179	G-A	HET
SBS	Chr2	28530117	C-A	HET
SBS	Chr3	9062491	C-T	HOMO
SBS	Chr3	11335475	A-T	HOMO
SBS	Chr3	31704333	C-T	HET
SBS	Chr4	14905580	A-G	HET
SBS	Chr5	5784660	G-A	HET
SBS	Chr5	8654875	C-T	HET
SBS	Chr5	16568562	C-G	HET	LOC_Os05g28300
SBS	Chr5	27924162	C-T	HET
SBS	Chr5	28563904	A-T	HET
SBS	Chr6	180636	G-A	HET
SBS	Chr6	180637	A-G	HET
SBS	Chr6	15765191	A-G	HOMO
SBS	Chr7	14391087	G-A	HET	LOC_Os07g25190
SBS	Chr8	4520278	T-A	HET
SBS	Chr8	21593212	T-C	HET
SBS	Chr9	7192129	C-T	HOMO
SBS	Chr9	7192130	C-T	HOMO
SBS	Chr9	7237239	G-T	HOMO
SBS	Chr11	3993459	C-A	HET
SBS	Chr11	23219362	C-T	HET
SBS	Chr12	11339456	G-A	HET
SBS	Chr12	15075425	G-A	HET

Deletions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	796657	796658	2
Deletion	Chr8	1023323	1023333	11
Deletion	Chr3	3968230	3968232	3
Deletion	Chr2	6481889	6481889	1
Deletion	Chr7	6702382	6702382	1
Deletion	Chr8	7005098	7005155	58
Deletion	Chr8	7014505	7014505	1	LOC_Os08g11960
Deletion	Chr1	7473839	7473846	8
Deletion	Chr10	7778570	7778576	7	LOC_Os10g14860
Deletion	Chr11	8145616	8145640	25
Deletion	Chr1	10884004	10884005	2
Deletion	Chr10	15069035	15069035	1
Deletion	Chr2	15293859	15293860	2	LOC_Os02g26050
Deletion	Chr10	15301896	15301896	1
Deletion	Chr10	16084284	16084284	1
Deletion	Chr7	18486030	18486031	2
Deletion	Chr2	18742059	18742059	1	LOC_Os02g31270
Deletion	Chr6	19719832	19719832	1
Deletion	Chr1	20882056	20882056	1
Deletion	Chr11	22722918	22723008	91
Deletion	Chr7	23941012	23941051	40
Deletion	Chr4	24931422	24931422	1
Deletion	Chr5	25597096	25597096	1
Deletion	Chr2	25967668	25967668	1
Deletion	Chr7	26828531	26828531	1
Deletion	Chr11	27012178	27012180	3	LOC_Os11g44670
Deletion	Chr1	28504376	28504376	1
Deletion	Chr2	28730531	28730536	6	LOC_Os02g47060

Insertions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	43081133	43081133	1
Insertion	Chr2	13479110	13479128	19
Insertion	Chr2	16147382	16147387	6
Insertion	Chr4	3358877	3358877	1	LOC_Os04g06400
Insertion	Chr4	6954011	6954043	33
Insertion	Chr4	14323130	14323250	121
Insertion	Chr4	31631129	31631204	76
Insertion	Chr5	12748126	12748126	1
Insertion	Chr5	29163155	29163156	2
Insertion	Chr6	12628917	12628917	1	LOC_Os06g21860
Insertion	Chr6	18875118	18875118	1
Insertion	Chr6	23125451	23125451	1
Insertion	Chr7	12164891	12164891	1
Insertion	Chr7	27252921	27252921	1
Insertion	Chr7	28603125	28603125	1
Insertion	Chr11	6805834	6805834	1
Insertion	Chr1	33701914	33701914	1
Insertion	Chr4	4571858	4571858	1
Insertion	Chr4	22459226	22459226	1
Insertion	Chr12	23737468	23737468	1

No Inversion

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	10686199	Chr5	22206173
Translocation	Chr8	10686207	Chr5	22206542
Translocation	Chr5	22204555	Chr1	3015868	LOC_Os01g06350
Translocation	Chr5	22206162	Chr1	3015817

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