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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr10	3100258	C-T	HET
SBS	Chr10	7899762	C-T	HET
SBS	Chr11	10667584	G-A	HET	LOC_Os11g18790
SBS	Chr11	12837555	T-A	HET
SBS	Chr11	19450718	G-T	HET
SBS	Chr11	28466262	G-A	HOMO
SBS	Chr11	6152285	A-G	HOMO
SBS	Chr2	32930380	T-G	HET
SBS	Chr3	19696004	C-T	HOMO
SBS	Chr3	33615891	G-A	HOMO	LOC_Os03g59050
SBS	Chr3	34284008	C-T	HOMO
SBS	Chr3	6651449	A-G	HET	LOC_Os03g12550
SBS	Chr3	7645242	G-A	HET
SBS	Chr4	20008065	C-A	HET
SBS	Chr4	25175411	A-G	HET
SBS	Chr4	25848792	G-C	HET
SBS	Chr5	15307808	A-C	HET
SBS	Chr5	15345861	A-T	HET
SBS	Chr5	28378160	G-T	HOMO	LOC_Os05g49490
SBS	Chr5	28378161	C-T	HOMO
SBS	Chr6	17635926	T-G	HET
SBS	Chr7	15964318	A-T	HOMO
SBS	Chr7	23409429	A-T	HOMO
SBS	Chr7	8985510	A-G	HET
SBS	Chr8	14359084	C-T	HET
SBS	Chr8	14489099	G-T	HET
SBS	Chr9	18959523	C-A	HOMO
SBS	Chr9	20590891	T-A	HET
SBS	Chr9	8324227	A-T	HET
SBS	Chr9	9236679	G-C	HET

Deletions: 30

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	47748	47748	1
Deletion	Chr12	3068449	3068449	1
Deletion	Chr9	3802875	3802875	1
Deletion	Chr11	8052057	8052064	8
Deletion	Chr3	8696967	8696973	7
Deletion	Chr3	8696978	8696984	7
Deletion	Chr2	10070862	10070871	10
Deletion	Chr5	12081285	12081285	1
Deletion	Chr2	12307277	12307277	1
Deletion	Chr6	13526679	13526690	12	LOC_Os06g23170
Deletion	Chr4	13980644	13980644	1
Deletion	Chr5	14289996	14289998	3
Deletion	Chr4	15227712	15227712	1
Deletion	Chr4	15254471	15254487	17
Deletion	Chr12	15794524	15794525	2
Deletion	Chr12	15917231	15917232	2	LOC_Os12g27120
Deletion	Chr1	18322638	18322638	1	LOC_Os01g33260
Deletion	Chr11	20236155	20236155	1
Deletion	Chr8	20352116	20352116	1
Deletion	Chr11	20594698	20594698	1
Deletion	Chr6	21918906	21918906	1
Deletion	Chr12	23749043	23749075	33
Deletion	Chr5	24178976	24178977	2
Deletion	Chr5	24753431	24753441	11	LOC_Os05g42320
Deletion	Chr1	27552136	27552138	3
Deletion	Chr5	28711316	28711323	8
Deletion	Chr5	28995216	28995217	2	LOC_Os05g50560
Deletion	Chr1	31720405	31720405	1
Deletion	Chr1	34050100	34050107	8
Deletion	Chr1	34753708	34753795	88	LOC_Os01g60090

Insertions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	17923241	17923241	1
Insertion	Chr1	34004703	34004703	1
Insertion	Chr1	42876421	42876426	6
Insertion	Chr10	1254945	1254945	1
Insertion	Chr10	2670206	2670259	54
Insertion	Chr11	15681965	15681993	29
Insertion	Chr11	18372525	18372572	48
Insertion	Chr12	19115284	19115299	16
Insertion	Chr12	9852480	9852481	2
Insertion	Chr2	26763921	26764003	83
Insertion	Chr2	8352718	8352720	3
Insertion	Chr3	13819173	13819177	5	LOC_Os03g24270
Insertion	Chr3	25744400	25744486	87
Insertion	Chr3	36203132	36203136	5
Insertion	Chr5	3018536	3018536	1
Insertion	Chr8	13915696	13915696	1
Insertion	Chr8	16213772	16213772	1
Insertion	Chr8	16899775	16899809	35
Insertion	Chr9	10406775	10406856	82
Insertion	Chr9	235973	235973	1
Insertion	Chr9	6881537	6881575	39
Insertion	Chr9	9607707	9607717	11

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	7366061	7366205
Inversion	Chr2	18800422	18852630

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	6315299	Chr1	40437249
Translocation	Chr9	6316840	Chr1	40445926
Translocation	Chr4	8867726	Chr3	13456995	LOC_Os04g16330
Translocation	Chr3	33614865	Chr2	16049259	LOC_Os03g59050
Translocation	Chr3	33615270	Chr2	16049245

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