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Mutant Information

Variant Information

Single base substitutions: 44

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	14593186	C-A	HET
SBS	Chr1	21079068	C-A	HET
SBS	Chr1	5382667	T-C	HOMO
SBS	Chr10	13767734	C-T	HET
SBS	Chr10	21159811	G-C	HET
SBS	Chr10	7209217	G-C	HET	LOC_Os10g13350
SBS	Chr11	21422111	C-T	HET
SBS	Chr11	26876363	G-A	HET
SBS	Chr12	10844427	G-A	HET
SBS	Chr12	13968897	G-T	HET
SBS	Chr12	14397075	C-A	HET
SBS	Chr12	14408991	A-T	HET	LOC_Os12g25080
SBS	Chr12	21722005	A-C	HET
SBS	Chr12	24650168	C-A	HET	LOC_Os12g39890
SBS	Chr2	11243101	T-C	HOMO
SBS	Chr2	31207099	C-A	HET
SBS	Chr2	694338	G-A	HET
SBS	Chr2	8919138	A-G	HOMO
SBS	Chr3	16568930	T-C	HET
SBS	Chr3	22843833	C-A	HOMO
SBS	Chr3	27381024	T-A	HET
SBS	Chr3	33122697	C-T	HOMO
SBS	Chr4	11354607	T-G	HET
SBS	Chr4	14021597	T-G	HOMO
SBS	Chr4	26826213	A-G	HOMO
SBS	Chr4	3212445	G-A	HET
SBS	Chr4	9931721	A-G	HET
SBS	Chr5	27852405	G-A	HOMO
SBS	Chr6	13370616	G-A	HET
SBS	Chr6	18581	T-A	HOMO
SBS	Chr6	19945797	G-T	HOMO
SBS	Chr6	25012402	C-T	HET
SBS	Chr7	10117367	A-G	HET
SBS	Chr7	10608673	C-T	HOMO
SBS	Chr7	12562800	A-G	HET
SBS	Chr7	1883994	G-A	HOMO
SBS	Chr7	27305421	A-T	HET
SBS	Chr7	28226866	T-A	HET
SBS	Chr7	4047563	G-A	HOMO
SBS	Chr7	7359651	T-C	HET
SBS	Chr8	12761748	G-A	HET
SBS	Chr8	23179984	G-A	HET
SBS	Chr8	26172160	G-T	HET
SBS	Chr8	8952951	T-C	HET

Deletions: 44

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	671892	671904	13
Deletion	Chr4	855444	855444	1
Deletion	Chr3	1038339	1038339	1
Deletion	Chr4	1633937	1633946	10	LOC_Os04g03700
Deletion	Chr12	2127317	2127317	1
Deletion	Chr4	2617320	2617329	10
Deletion	Chr2	3590576	3590576	1
Deletion	Chr2	3818137	3818137	1
Deletion	Chr4	4206030	4206030	1
Deletion	Chr3	5700814	5700814	1
Deletion	Chr9	5853478	5853488	11
Deletion	Chr11	7140700	7140700	1
Deletion	Chr8	7384957	7384973	17
Deletion	Chr2	9121091	9121136	46
Deletion	Chr9	10508594	10508594	1
Deletion	Chr3	10795077	10795077	1
Deletion	Chr4	11102479	11102482	4
Deletion	Chr12	12048958	12048958	1
Deletion	Chr3	12310960	12310963	4	LOC_Os03g21540
Deletion	Chr4	13158291	13158291	1
Deletion	Chr6	13355946	13355946	1
Deletion	Chr4	14066295	14066295	1
Deletion	Chr2	14769713	14769716	4
Deletion	Chr11	15784365	15784365	1
Deletion	Chr9	16162556	16162620	65	LOC_Os09g26640
Deletion	Chr3	16374547	16374547	1
Deletion	Chr8	16789001	16806000	17000	6
Deletion	Chr4	17425601	17425604	4
Deletion	Chr7	17560456	17560478	23
Deletion	Chr6	18408281	18408354	74
Deletion	Chr6	18706664	18706664	1
Deletion	Chr8	21178244	21178255	12
Deletion	Chr9	21831559	21831577	19
Deletion	Chr12	22852232	22852236	5
Deletion	Chr2	22886718	22886718	1
Deletion	Chr1	23508269	23508311	43
Deletion	Chr2	23726362	23726364	3
Deletion	Chr1	24037825	24037832	8
Deletion	Chr4	25193238	25193247	10
Deletion	Chr1	25334606	25334621	16
Deletion	Chr4	26266087	26266103	17
Deletion	Chr8	27504852	27504853	2
Deletion	Chr2	27740346	27740381	36
Deletion	Chr5	29663237	29663245	9	LOC_Os05g51700

Insertions: 10

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	11625861	11625862	2
Insertion	Chr10	20923822	20923822	1
Insertion	Chr2	2329059	2329134	76
Insertion	Chr3	11261900	11261901	2
Insertion	Chr4	1453867	1453872	6
Insertion	Chr4	4051859	4051861	3
Insertion	Chr6	18352333	18352333	1
Insertion	Chr6	79800	79800	1
Insertion	Chr7	1740211	1740211	1
Insertion	Chr8	7908163	7908201	39

Inversions: 8

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	7796853	7797145
Inversion	Chr1	11163197	11163269
Inversion	Chr1	12500982	12501131
Inversion	Chr8	21784295	21813614	LOC_Os08g34680
Inversion	Chr8	21784483	21812780
Inversion	Chr1	23719734	23881188
Inversion	Chr1	23719748	23881192
Inversion	Chr11	25188550	25188723

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	13912855	Chr3	19779915	LOC_Os03g35710
Translocation	Chr6	13912867	Chr3	19772097
Translocation	Chr12	18092743	Chr3	25788773

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