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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	40351587	G-A	HOMO
SBS	Chr1	8476914	T-G	HET
SBS	Chr10	21861553	T-A	HOMO
SBS	Chr11	28929046	G-A	HOMO
SBS	Chr12	1346761	C-T	HET
SBS	Chr12	1346762	G-T	HET	LOC_Os12g03450
SBS	Chr12	15722605	C-A	HET
SBS	Chr12	7539606	G-C	HET	LOC_Os12g13450
SBS	Chr2	3959736	T-A	HOMO
SBS	Chr2	5235241	G-A	HET
SBS	Chr2	6193169	C-T	HET	LOC_Os02g11940
SBS	Chr3	2352141	G-A	HOMO
SBS	Chr3	24924494	C-T	HET
SBS	Chr4	11868923	T-C	HET
SBS	Chr4	26679856	C-T	HET
SBS	Chr4	479115	C-T	HET
SBS	Chr4	7916711	C-T	HET
SBS	Chr5	25940405	G-A	HOMO
SBS	Chr6	17200694	A-G	HET
SBS	Chr6	27607352	C-A	HET
SBS	Chr7	15148084	T-A	HOMO
SBS	Chr7	4789637	C-T	HOMO	LOC_Os07g09180
SBS	Chr8	13535480	G-T	HET
SBS	Chr8	18369846	A-G	HET
SBS	Chr8	20043016	C-T	HET
SBS	Chr8	23611173	C-T	HET
SBS	Chr9	16114775	C-T	HET

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	30156	30174	19	LOC_Os04g01030
Deletion	Chr1	587508	587509	2	LOC_Os01g02080
Deletion	Chr4	2250118	2250131	14	LOC_Os04g04670
Deletion	Chr4	2592744	2592746	3	LOC_Os04g05200
Deletion	Chr4	3074877	3074877	1
Deletion	Chr1	5532001	5554000	22000	4
Deletion	Chr2	6204934	6204940	7
Deletion	Chr6	7506823	7506832	10
Deletion	Chr5	8172480	8172484	5
Deletion	Chr3	8280252	8280271	20
Deletion	Chr9	10198005	10198007	3
Deletion	Chr2	10452681	10452687	7
Deletion	Chr12	10915512	10915512	1
Deletion	Chr11	11422393	11422401	9	LOC_Os11g19830
Deletion	Chr1	11816832	11816832	1
Deletion	Chr8	11869217	11869218	2
Deletion	Chr2	12181115	12181119	5
Deletion	Chr6	13938453	13938454	2
Deletion	Chr6	14053791	14053802	12
Deletion	Chr11	14937244	14937245	2
Deletion	Chr1	15868001	16645000	777000	124
Deletion	Chr8	16260979	16260981	3
Deletion	Chr2	16293449	16293449	1	LOC_Os02g27520
Deletion	Chr8	16394272	16394273	2
Deletion	Chr1	16752036	16752036	1
Deletion	Chr2	18824757	18824825	69
Deletion	Chr11	22395825	22395825	1
Deletion	Chr12	22466496	22466500	5	LOC_Os12g36680
Deletion	Chr12	22826346	22826346	1
Deletion	Chr12	23217879	23217879	1
Deletion	Chr2	26455433	26455434	2
Deletion	Chr11	27065427	27065429	3
Deletion	Chr3	31275058	31275058	1
Deletion	Chr1	40344775	40344779	5

Insertions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	16256193	16256193	1
Insertion	Chr1	19330590	19330590	1
Insertion	Chr1	22509054	22509055	2
Insertion	Chr1	30281226	30281226	1
Insertion	Chr10	1416699	1416699	1
Insertion	Chr11	930125	930125	1
Insertion	Chr12	13293156	13293156	1
Insertion	Chr12	21643787	21643794	8
Insertion	Chr12	23534823	23534823	1
Insertion	Chr3	15780243	15780244	2
Insertion	Chr3	35121493	35121493	1
Insertion	Chr4	16999479	16999570	92
Insertion	Chr4	28820146	28820146	1
Insertion	Chr5	10026985	10026985	1
Insertion	Chr5	29942088	29942088	1
Insertion	Chr7	24850981	24851043	63
Insertion	Chr8	17878549	17878571	23
Insertion	Chr9	10231121	10231224	104
Insertion	Chr9	22463082	22463084	3	2
Insertion	Chr9	22463082	22463087	6	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	10826994	10959616
Inversion	Chr2	10826999	10959623

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	1331076	Chr7	28606609

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