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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	20335370	C-T	HOMO
SBS	Chr1	22268142	A-T	HET
SBS	Chr1	24008848	A-T	HET
SBS	Chr1	37597957	T-A	HET
SBS	Chr1	39402453	G-A	HET
SBS	Chr2	882486	G-A	HOMO
SBS	Chr2	16006761	G-A	HET
SBS	Chr2	17874650	G-A	HET	LOC_Os02g30100
SBS	Chr3	9690927	T-A	HET
SBS	Chr3	21236292	C-A	HET	LOC_Os03g38250
SBS	Chr3	32294153	A-T	HET
SBS	Chr3	35948539	A-G	HET	LOC_Os03g63644
SBS	Chr4	18223421	C-A	HET
SBS	Chr5	10907948	C-T	HET
SBS	Chr5	14670208	T-C	HET
SBS	Chr5	21910741	A-T	HET
SBS	Chr5	23824033	C-T	HOMO
SBS	Chr7	4486353	T-A	HOMO
SBS	Chr8	15080888	A-G	HET	LOC_Os08g24910
SBS	Chr9	1373283	T-C	HET
SBS	Chr9	4907812	G-T	HET
SBS	Chr9	18645500	G-A	HET
SBS	Chr9	18722565	A-G	HET
SBS	Chr10	1091462	T-C	HOMO
SBS	Chr10	10064415	C-T	HET	LOC_Os10g20050
SBS	Chr10	20409755	C-T	HET
SBS	Chr11	16664143	T-A	HET
SBS	Chr11	24118545	A-T	HOMO
SBS	Chr12	14173433	G-C	HOMO
SBS	Chr12	18228351	C-T	HOMO	LOC_Os12g30360

Deletions: 33

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	311844	311846	3
Deletion	Chr10	438387	438396	10
Deletion	Chr11	937079	937080	2
Deletion	Chr4	1303871	1303872	2	LOC_Os04g03130
Deletion	Chr1	4503669	4503674	6	LOC_Os01g08970
Deletion	Chr4	4675959	4675961	3
Deletion	Chr10	6739313	6739323	11	LOC_Os10g12130
Deletion	Chr9	6887889	6887898	10
Deletion	Chr4	7432920	7432922	3
Deletion	Chr11	7476097	7476152	56
Deletion	Chr5	9346439	9346454	16
Deletion	Chr4	10274012	10274222	211
Deletion	Chr8	11456213	11456222	10
Deletion	Chr7	12147185	12147185	1
Deletion	Chr10	12555198	12555200	3
Deletion	Chr2	12556123	12556126	4
Deletion	Chr7	13111997	13112008	12
Deletion	Chr2	13120932	13120933	2
Deletion	Chr10	13317935	13317935	1
Deletion	Chr8	14658478	14658508	31
Deletion	Chr12	16544877	16544879	3
Deletion	Chr12	17186372	17186374	3
Deletion	Chr4	17563850	17563850	1
Deletion	Chr3	17776800	17776800	1
Deletion	Chr7	19689934	19689935	2
Deletion	Chr8	19742026	19742029	4
Deletion	Chr9	21243504	21243529	26	LOC_Os09g36830
Deletion	Chr5	22580910	22580910	1
Deletion	Chr6	22835658	22835660	3	LOC_Os06g38540
Deletion	Chr10	22881921	22881930	10
Deletion	Chr1	23638748	23638754	7
Deletion	Chr5	27585983	27585987	5
Deletion	Chr4	33492536	33492539	4

Insertions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	871582	871591	10
Insertion	Chr1	26495943	26495943	1
Insertion	Chr4	13560818	13560821	4
Insertion	Chr4	15144491	15144491	1
Insertion	Chr5	666162	666200	39
Insertion	Chr8	8735047	8735052	6	LOC_Os08g14530
Insertion	Chr8	12245075	12245075	1
Insertion	Chr8	17910649	17910657	9
Insertion	Chr9	11903995	11903995	1
Insertion	Chr12	5933028	5933029	2
Insertion	Chr1	39286350	39286351	2
Insertion	Chr8	21867904	21867904	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr10	16582610	17228641
Inversion	Chr10	19745908	19991149
Inversion	Chr10	19745920	19991155
Inversion	Chr7	22328421	22328613

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	3989541	Chr2	12148205
Translocation	Chr10	16582588	Chr8	15080478
Translocation	Chr10	17228622	Chr8	15124581	LOC_Os08g24946
Translocation	Chr12	26113255	Chr10	4003887

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