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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	29850468	T-A	HET
SBS	Chr10	16884107	C-G	HET
SBS	Chr11	14316427	A-G	HET
SBS	Chr12	25112145	T-A	HOMO
SBS	Chr12	4186237	A-G	HOMO
SBS	Chr2	29105182	T-G	HET
SBS	Chr2	29664512	T-A	HET
SBS	Chr2	4762025	C-T	HET
SBS	Chr2	6820017	T-G	HET
SBS	Chr3	2266698	T-C	HOMO
SBS	Chr3	35282612	G-A	HET
SBS	Chr4	21099478	G-T	HET
SBS	Chr4	5233825	C-A	HOMO
SBS	Chr5	12286609	A-T	HOMO
SBS	Chr5	27651065	G-A	HET	LOC_Os05g48240
SBS	Chr6	16972886	T-C	HET
SBS	Chr6	30730965	A-T	HET
SBS	Chr6	4487998	G-A	HET
SBS	Chr7	2358289	C-T	HET
SBS	Chr7	2358290	C-A	HET
SBS	Chr7	2358291	C-A	HET
SBS	Chr7	618059	C-T	HET
SBS	Chr8	20991752	T-A	HET
SBS	Chr8	24475357	G-T	HET	LOC_Os08g38710

Deletions: 31

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	36726	36751	26
Deletion	Chr9	205323	205325	3
Deletion	Chr3	236142	236142	1	LOC_Os03g01330
Deletion	Chr9	1445454	1445454	1
Deletion	Chr9	1916185	1916187	3
Deletion	Chr12	2561023	2561023	1
Deletion	Chr11	3646773	3646773	1
Deletion	Chr11	4077167	4077168	2
Deletion	Chr10	4650355	4650356	2
Deletion	Chr5	5320161	5320161	1
Deletion	Chr10	5934982	5934985	4
Deletion	Chr2	6670683	6670683	1
Deletion	Chr10	7671058	7671060	3
Deletion	Chr5	9122890	9122892	3
Deletion	Chr3	9281987	9281988	2
Deletion	Chr11	12041419	12041421	3
Deletion	Chr11	12083503	12083555	53
Deletion	Chr6	15177261	15177261	1
Deletion	Chr6	15177476	15177478	3
Deletion	Chr3	15282839	15282840	2
Deletion	Chr9	15477633	15477640	8
Deletion	Chr1	21182147	21182147	1
Deletion	Chr5	21422062	21422063	2
Deletion	Chr2	23629361	23629361	1
Deletion	Chr1	25216126	25216126	1
Deletion	Chr1	26283427	26283433	7
Deletion	Chr12	26542586	26542590	5
Deletion	Chr8	26986286	26986286	1
Deletion	Chr4	28329498	28329550	53
Deletion	Chr6	31069516	31069528	13
Deletion	Chr2	34022488	34022488	1

Insertions: 27

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	23900997	23901033	37
Insertion	Chr1	28840195	28840198	4
Insertion	Chr10	20812073	20812074	2
Insertion	Chr10	7060631	7060632	2
Insertion	Chr10	9354283	9354283	1
Insertion	Chr11	24795260	24795330	71
Insertion	Chr11	26865288	26865315	28
Insertion	Chr11	7252156	7252156	1
Insertion	Chr12	14321926	14321927	2
Insertion	Chr12	15629422	15629512	91
Insertion	Chr4	26742355	26742355	1
Insertion	Chr4	8673593	8673618	26
Insertion	Chr4	9825628	9825628	1
Insertion	Chr5	15233892	15233892	1
Insertion	Chr6	1246778	1246804	27
Insertion	Chr6	19322162	19322226	65
Insertion	Chr6	6363280	6363281	2
Insertion	Chr7	17694352	17694352	1
Insertion	Chr7	25271507	25271507	1
Insertion	Chr7	5674703	5674703	1
Insertion	Chr8	1298824	1298824	1
Insertion	Chr8	15440517	15440517	1
Insertion	Chr8	16861603	16861722	120
Insertion	Chr8	23996494	23996565	72
Insertion	Chr8	7270068	7270069	2
Insertion	Chr8	9992954	9993021	68
Insertion	Chr9	16716217	16716217	1

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	17071933	17260705	LOC_Os01g31560
Inversion	Chr6	25960492	25962613
Inversion	Chr4	29155586	29231281	LOC_Os04g49040
Inversion	Chr4	29155589	29231281	LOC_Os04g49040
Inversion	Chr1	29166892	29249656	LOC_Os01g50770
Inversion	Chr1	29166976	29249667	LOC_Os01g50770

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	9719826	Chr5	16406635

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