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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	1305965	C-A	HET
SBS	Chr1	17270378	T-C	HOMO
SBS	Chr1	21715862	T-G	HOMO
SBS	Chr1	2665738	C-A	HET
SBS	Chr1	36596657	A-G	HOMO
SBS	Chr10	16709901	T-A	HOMO
SBS	Chr11	3743167	G-T	HET
SBS	Chr12	19660074	G-C	HET
SBS	Chr12	23278581	T-G	HET
SBS	Chr12	23278583	C-T	HET
SBS	Chr12	24061024	T-C	HET
SBS	Chr2	14867937	C-T	HET
SBS	Chr2	21089495	A-G	HET
SBS	Chr2	23190873	C-A	HET
SBS	Chr2	701795	C-T	HOMO
SBS	Chr4	12503150	G-A	HET
SBS	Chr4	22287231	C-A	HET
SBS	Chr4	28379174	G-C	HET
SBS	Chr7	2027784	T-A	HET
SBS	Chr7	20637859	T-C	HET
SBS	Chr7	28320612	A-T	HET
SBS	Chr7	9503871	T-A	HET
SBS	Chr7	9503872	T-A	HET
SBS	Chr8	1895874	G-A	HET	LOC_Os08g03970
SBS	Chr8	2463086	G-A	HOMO
SBS	Chr9	21990699	T-C	HET
SBS	Chr9	5763922	C-T	HOMO

Deletions: 42

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	2316186	2316186	1
Deletion	Chr9	2440769	2440770	2
Deletion	Chr1	2551382	2551389	8
Deletion	Chr7	2706959	2706959	1
Deletion	Chr9	2827739	2827739	1
Deletion	Chr9	2835769	2835769	1
Deletion	Chr11	3400143	3400143	1
Deletion	Chr12	3579001	3586000	7000	2
Deletion	Chr6	4591548	4591556	9
Deletion	Chr10	5527876	5527876	1
Deletion	Chr8	5935232	5935232	1
Deletion	Chr12	6176575	6176575	1
Deletion	Chr5	7279001	7359000	80000	14
Deletion	Chr2	7461279	7461280	2
Deletion	Chr4	7486265	7486265	1
Deletion	Chr2	8032187	8032282	96
Deletion	Chr4	8892375	8892381	7
Deletion	Chr2	10290023	10290023	1
Deletion	Chr5	10300837	10300838	2
Deletion	Chr6	11130939	11130939	1
Deletion	Chr8	12253416	12253416	1
Deletion	Chr6	12500452	12500452	1
Deletion	Chr8	12636136	12636139	4
Deletion	Chr4	12848194	12848194	1
Deletion	Chr2	13225705	13225706	2
Deletion	Chr12	14792269	14792269	1
Deletion	Chr10	15551796	15551805	10
Deletion	Chr12	15960210	15960210	1
Deletion	Chr11	16713653	16713653	1
Deletion	Chr11	18136981	18136981	1
Deletion	Chr3	18199991	18199994	4
Deletion	Chr6	18354556	18354556	1
Deletion	Chr7	19870049	19870049	1
Deletion	Chr6	20321739	20321804	66
Deletion	Chr11	20775807	20775808	2
Deletion	Chr11	21126278	21126279	2
Deletion	Chr5	21513129	21513130	2
Deletion	Chr8	22865551	22865552	2
Deletion	Chr4	23011673	23011726	54
Deletion	Chr11	23371576	23371576	1	LOC_Os11g39250
Deletion	Chr1	27444448	27444448	1
Deletion	Chr7	29013490	29013528	39

Insertions: 42

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	16850282	16850360	79
Insertion	Chr1	20618584	20618658	75
Insertion	Chr1	21813055	21813139	85
Insertion	Chr10	18597765	18597855	91
Insertion	Chr10	4566271	4566320	50
Insertion	Chr11	11262675	11262730	56
Insertion	Chr11	5536968	5536968	1
Insertion	Chr11	9567187	9567268	82
Insertion	Chr12	12474476	12474478	3
Insertion	Chr12	15943203	15943204	2
Insertion	Chr12	21982395	21982395	1
Insertion	Chr2	20043129	20043187	59	LOC_Os02g33660
Insertion	Chr2	23628530	23628531	2
Insertion	Chr2	24445524	24445529	6
Insertion	Chr2	26739337	26739337	1
Insertion	Chr3	18933761	18933866	106
Insertion	Chr3	28208163	28208163	1
Insertion	Chr3	6449242	6449242	1
Insertion	Chr4	10479946	10479946	1
Insertion	Chr4	1941960	1941963	4
Insertion	Chr4	25267532	25267532	1
Insertion	Chr4	27474105	27474105	1
Insertion	Chr4	3094002	3094116	115
Insertion	Chr4	31912663	31912663	1
Insertion	Chr4	7633806	7633807	2
Insertion	Chr4	9530143	9530143	1
Insertion	Chr5	18968558	18968564	7
Insertion	Chr5	21823814	21823815	2
Insertion	Chr6	13982283	13982283	1
Insertion	Chr6	29254786	29254787	2
Insertion	Chr6	30434596	30434597	2
Insertion	Chr6	31057306	31057417	112
Insertion	Chr6	31057320	31057403	84
Insertion	Chr7	10609919	10609919	1
Insertion	Chr7	14400570	14400570	1
Insertion	Chr7	27387585	27387585	1
Insertion	Chr8	15219905	15219981	77
Insertion	Chr8	16921452	16921454	3
Insertion	Chr8	22912621	22912621	1
Insertion	Chr8	7530426	7530426	1
Insertion	Chr8	8733100	8733100	1
Insertion	Chr9	4862084	4862084	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	2846140	2846282
Inversion	Chr7	9561306	9894250
Inversion	Chr7	22443900	22719925	LOC_Os07g37480
Inversion	Chr7	22443906	22719927	LOC_Os07g37480

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	16477110	Chr1	26060858	LOC_Os01g45880

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