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Mutant Information

Variant Information

Single base substitutions: 50

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	10035219	A-T	HET	LOC_Os01g17450
SBS	Chr1	13731639	C-T	HET
SBS	Chr1	13985196	C-T	HET	LOC_Os01g24830
SBS	Chr10	13933042	C-T	HOMO
SBS	Chr10	14000611	T-C	HOMO
SBS	Chr10	14035180	C-T	HOMO
SBS	Chr10	19263249	A-G	HET
SBS	Chr10	6635710	C-T	HET	LOC_Os10g11970
SBS	Chr11	19933453	A-C	HET
SBS	Chr11	23620610	C-T	HET
SBS	Chr12	19334884	C-T	HET
SBS	Chr12	19334890	A-T	HET
SBS	Chr12	21739452	A-G	HOMO	LOC_Os12g35720
SBS	Chr12	22703257	A-T	HET
SBS	Chr2	21125319	C-T	HET
SBS	Chr2	26244136	A-T	HET
SBS	Chr2	32765766	G-A	HET	LOC_Os02g53550
SBS	Chr2	33778219	G-A	HET
SBS	Chr3	12381002	G-C	HOMO
SBS	Chr3	22486454	C-T	HET
SBS	Chr3	31183754	A-C	HET
SBS	Chr3	32617587	T-C	HET
SBS	Chr3	35863057	T-A	HOMO
SBS	Chr3	36351882	A-G	HET	LOC_Os03g64320
SBS	Chr3	6506541	G-A	HOMO
SBS	Chr4	12449122	A-G	HOMO	LOC_Os04g21990
SBS	Chr4	14865278	A-G	HOMO
SBS	Chr4	17263378	C-T	HET
SBS	Chr4	5537050	G-A	HOMO	LOC_Os04g10250
SBS	Chr4	5878626	T-C	HOMO
SBS	Chr5	14962770	C-A	HOMO	LOC_Os05g25720
SBS	Chr5	16522586	C-T	HOMO
SBS	Chr5	18016039	G-T	HET
SBS	Chr5	19804923	G-T	HET
SBS	Chr5	20966354	T-C	HET
SBS	Chr5	8108832	C-A	HOMO
SBS	Chr6	23859018	C-A	HET
SBS	Chr6	27820001	T-A	HET
SBS	Chr6	28034467	C-T	HET
SBS	Chr6	28761672	C-T	HET
SBS	Chr7	20903520	A-C	HET
SBS	Chr7	25370863	C-T	HET
SBS	Chr7	7680170	G-A	HET	LOC_Os07g13390
SBS	Chr8	14366299	G-A	HET	LOC_Os08g23740
SBS	Chr8	19227725	T-C	HOMO
SBS	Chr8	4514744	T-A	HET
SBS	Chr9	1424437	C-T	HET	LOC_Os09g03030
SBS	Chr9	16501551	C-G	HET	LOC_Os09g27135
SBS	Chr9	22496004	C-T	HET
SBS	Chr9	5252859	A-G	HET

Deletions: 37

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	324874	324874	1
Deletion	Chr12	2621558	2621560	3
Deletion	Chr2	5796875	5796967	93
Deletion	Chr8	6147675	6147677	3
Deletion	Chr4	9190294	9190294	1
Deletion	Chr10	9961797	9961801	5
Deletion	Chr3	10704635	10704642	8	LOC_Os03g19104
Deletion	Chr1	11007402	11007402	1
Deletion	Chr7	12218119	12218120	2
Deletion	Chr5	12522477	12522477	1
Deletion	Chr7	13263218	13263218	1	LOC_Os07g23480
Deletion	Chr7	13525080	13525108	29
Deletion	Chr1	14668001	14681000	13000	2
Deletion	Chr3	15057789	15057789	1
Deletion	Chr3	15339100	15339100	1
Deletion	Chr10	15353026	15353026	1
Deletion	Chr4	15370844	15370844	1
Deletion	Chr6	15471302	15471454	153
Deletion	Chr5	16452214	16452245	32	LOC_Os05g28120
Deletion	Chr11	17110629	17110640	12	LOC_Os11g29490
Deletion	Chr8	18565879	18565905	27
Deletion	Chr6	18662317	18662317	1
Deletion	Chr9	19192845	19192854	10
Deletion	Chr4	20273734	20273734	1
Deletion	Chr8	20613842	20613933	92
Deletion	Chr5	20839914	20839914	1	LOC_Os05g35100
Deletion	Chr10	20904904	20904904	1
Deletion	Chr5	21031185	21031255	71
Deletion	Chr5	21545104	21545104	1
Deletion	Chr7	23436476	23436476	1	LOC_Os07g39114
Deletion	Chr6	26763350	26763350	1
Deletion	Chr1	28807960	28807968	9
Deletion	Chr11	28882552	28882554	3
Deletion	Chr1	30152503	30152503	1
Deletion	Chr2	33535001	33548000	13000	3
Deletion	Chr1	35425384	35425384	1
Deletion	Chr3	36095980	36095980	1	LOC_Os03g63870

Insertions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	15932605	15932605	1
Insertion	Chr1	16915036	16915036	1
Insertion	Chr1	9996373	9996373	1
Insertion	Chr10	2799446	2799446	1
Insertion	Chr10	9989957	9989962	6
Insertion	Chr11	12094442	12094498	57
Insertion	Chr11	15380594	15380652	59
Insertion	Chr11	18977940	18978012	73
Insertion	Chr12	418947	419056	110	LOC_Os12g01700
Insertion	Chr12	4691131	4691132	2
Insertion	Chr2	20067832	20067832	1
Insertion	Chr2	6767052	6767052	1
Insertion	Chr2	9359458	9359458	1
Insertion	Chr3	15394250	15394250	1
Insertion	Chr4	10895202	10895202	1
Insertion	Chr4	27189648	27189648	1
Insertion	Chr4	3940886	3940886	1
Insertion	Chr5	11965739	11965742	4
Insertion	Chr5	16384705	16384713	9
Insertion	Chr5	21261086	21261086	1
Insertion	Chr8	10015031	10015034	4
Insertion	Chr9	1023000	1023000	1

No Inversion

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	8825400	Chr9	22024982
Translocation	Chr10	8825409	Chr9	22024251

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