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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	21058758	C-T	HET	INTERGENIC
SBS	Chr10	10778828	C-A	HOMO	INTERGENIC
SBS	Chr10	13291615	A-T	HET	INTRON
SBS	Chr10	2200180	G-A	HET	INTERGENIC
SBS	Chr11	10053709	C-T	HET	INTERGENIC
SBS	Chr11	10372372	T-A	HET	INTRON
SBS	Chr12	17592050	C-T	HET	INTRON
SBS	Chr2	35269024	A-G	HET	INTERGENIC
SBS	Chr2	35723251	G-A	HET	INTRON
SBS	Chr2	8885142	G-C	HOMO	INTERGENIC
SBS	Chr2	9876405	G-T	HOMO	INTERGENIC
SBS	Chr3	8037179	G-A	HET	INTERGENIC
SBS	Chr3	9959620	C-A	HOMO	INTERGENIC
SBS	Chr4	15949885	G-T	HOMO	SYNONYMOUS_CODING
SBS	Chr5	18653857	A-G	HOMO	INTRON
SBS	Chr5	27132970	A-G	HET	INTRON
SBS	Chr6	13308438	C-T	HET	INTERGENIC
SBS	Chr6	13308439	G-T	HET	INTERGENIC
SBS	Chr6	20343615	C-T	HET	INTERGENIC
SBS	Chr6	23800688	T-A	HET	INTERGENIC
SBS	Chr6	26209172	G-T	HET	SPLICE_SITE_ACCEPTOR	LOC_Os06g43580
SBS	Chr6	9538157	C-A	HET	INTERGENIC
SBS	Chr7	20056705	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os07g33570
SBS	Chr8	12303359	T-C	HOMO	INTERGENIC
SBS	Chr8	17081579	G-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os08g28040
SBS	Chr8	26853943	C-T	HET	INTERGENIC
SBS	Chr8	27943503	A-T	HET	INTRON
SBS	Chr8	7537754	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os08g12720
SBS	Chr9	11466222	G-C	HET	INTERGENIC
SBS	Chr9	17888589	A-G	HET	INTERGENIC
SBS	Chr9	3357329	C-T	HET	INTERGENIC

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	333909	333910	1
Deletion	Chr12	456168	456169	1
Deletion	Chr8	4102996	4103004	8
Deletion	Chr12	6850684	6850696	12	LOC_Os12g12450
Deletion	Chr2	8067005	8067030	25
Deletion	Chr2	9879007	9879216	209	LOC_Os02g17230
Deletion	Chr2	10018534	10020192	1658
Deletion	Chr2	10166278	10166284	6
Deletion	Chr10	13287145	13287146	1
Deletion	Chr11	15733665	15733668	3
Deletion	Chr2	15990245	15990247	2
Deletion	Chr12	17829927	17829929	2
Deletion	Chr12	23190755	23190756	1	LOC_Os12g37770
Deletion	Chr12	23207079	23207082	3
Deletion	Chr12	26726641	26726652	11	LOC_Os12g43020
Deletion	Chr4	27274503	27274505	2
Deletion	Chr3	27992317	27992320	3
Deletion	Chr2	28311801	28311802	1
Deletion	Chr1	29335069	29335543	474
Deletion	Chr1	37455423	37455431	8	LOC_Os01g64550

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	17381719	17381719	1
Insertion	Chr2	8412118	8412121	4
Insertion	Chr6	10493040	10493041	2
Insertion	Chr6	27023683	27023684	2
Insertion	Chr6	29432069	29432070	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	17705608	17793895	LOC_Os09g29130
Inversion	Chr2	33970499	34053825	LOC_Os02g55600
Inversion	Chr2	33970514	34053826	LOC_Os02g55600

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	1631172	Chr11	10418312	LOC_Os12g03940
Translocation	Chr11	6261411	Chr1	29335090
Translocation	Chr12	8582209	Chr1	19169592	LOC_Os01g34760
Translocation	Chr2	19415623	Chr1	7228880	LOC_Os02g32690
Translocation	Chr12	25927137	Chr2	10020236	2

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