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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	20275474	C-T	HET	INTERGENIC
SBS	Chr1	20987456	A-G	HET	INTERGENIC
SBS	Chr1	20987457	A-T	HET	INTERGENIC
SBS	Chr1	26681081	C-T	HET	INTERGENIC
SBS	Chr1	42258110	G-A	HET	INTERGENIC
SBS	Chr10	16372939	G-A	HET	SYNONYMOUS_CODING
SBS	Chr10	16607758	C-A	HOMO	INTERGENIC
SBS	Chr10	20785914	T-A	HET	INTERGENIC
SBS	Chr11	11912521	A-T	HET	INTRON
SBS	Chr11	18365634	C-T	HET	INTERGENIC
SBS	Chr11	24814762	T-C	HET	INTERGENIC
SBS	Chr11	25295409	T-A	HET	INTERGENIC
SBS	Chr12	7189973	C-T	HET	INTERGENIC
SBS	Chr12	7811027	C-T	HET	INTERGENIC
SBS	Chr2	29100753	T-G	HET	SYNONYMOUS_CODING
SBS	Chr3	1189726	C-G	HET	INTERGENIC
SBS	Chr3	24739053	C-T	HOMO	INTERGENIC
SBS	Chr3	34352986	G-A	HET	INTERGENIC
SBS	Chr3	5257569	C-T	HET	INTRON
SBS	Chr4	16732583	A-T	HET	INTRON
SBS	Chr5	15470498	A-G	HET	INTERGENIC
SBS	Chr5	18718382	G-T	HET	INTERGENIC
SBS	Chr6	12672722	C-T	HOMO	INTERGENIC
SBS	Chr6	17652576	T-A	HOMO	INTERGENIC
SBS	Chr6	28604747	C-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g47170
SBS	Chr6	5687717	C-T	HET	INTERGENIC
SBS	Chr7	7213071	G-T	HOMO	INTERGENIC
SBS	Chr7	8437178	G-T	HOMO	SYNONYMOUS_CODING
SBS	Chr9	13805119	C-G	HOMO	INTRON
SBS	Chr9	9083723	T-A	HET	INTERGENIC

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	209872	209874	2
Deletion	Chr4	6535350	6535351	1	LOC_Os04g11910
Deletion	Chr7	6730317	6730325	8
Deletion	Chr6	14007687	14007692	5
Deletion	Chr11	14719947	14719952	5
Deletion	Chr2	17674990	17675202	212	LOC_Os02g29710
Deletion	Chr4	19680785	19680794	9	LOC_Os04g32650
Deletion	Chr5	21014494	21014505	11
Deletion	Chr1	21531203	21531207	4
Deletion	Chr8	21805141	21805142	1
Deletion	Chr11	22526410	22526411	1
Deletion	Chr8	24764198	24764201	3
Deletion	Chr2	24965671	24965674	3
Deletion	Chr1	25519002	25519007	5
Deletion	Chr4	27164100	27164117	17
Deletion	Chr1	37299528	37299530	2

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	14632859	14632862	4
Insertion	Chr11	26129615	26129616	2
Insertion	Chr6	6645100	6645100	1
Insertion	Chr7	3223558	3223561	4

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	5260762	7091682

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	12101157	Chr1	17417177

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