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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	4057814	A-G	HOMO	INTERGENIC
SBS	Chr1	7355529	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g13200
SBS	Chr1	12591264	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g22390
SBS	Chr1	12591267	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g22390
SBS	Chr1	32667251	G-T	HOMO	UTR_5_PRIME
SBS	Chr2	21159677	T-C	HET	INTRON
SBS	Chr2	28357750	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os02g46510
SBS	Chr3	21768834	G-A	HET	INTRON
SBS	Chr3	26857354	C-T	HET	INTERGENIC
SBS	Chr3	28278108	A-G	HET	INTERGENIC
SBS	Chr3	31115263	T-A	HET	INTERGENIC
SBS	Chr4	17624857	G-T	HET	INTERGENIC
SBS	Chr4	25383920	A-G	HET	SYNONYMOUS_CODING
SBS	Chr5	8534982	C-T	HET	UTR_5_PRIME
SBS	Chr5	13015996	T-C	HET	INTRON
SBS	Chr5	14050171	A-G	HET	INTERGENIC
SBS	Chr5	28392055	T-C	HET	INTERGENIC
SBS	Chr6	12871063	G-A	HOMO	INTRON
SBS	Chr6	20458378	A-C	HOMO	INTERGENIC
SBS	Chr6	27298892	T-A	HOMO	INTERGENIC
SBS	Chr7	1595385	T-A	HET	UTR_3_PRIME
SBS	Chr9	5558327	G-A	HET	INTERGENIC
SBS	Chr9	5558328	G-A	HET	INTERGENIC
SBS	Chr10	2435728	C-T	HET	INTERGENIC
SBS	Chr12	23349659	C-T	HET	INTERGENIC

Deletions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	1499001	1559000	60000	11
Deletion	Chr1	5138048	5138051	3
Deletion	Chr11	17258775	17258786	11
Deletion	Chr7	22764584	22764585	1
Deletion	Chr6	26953059	26953066	7

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	8674877	8674878	2
Insertion	Chr7	19445845	19445846	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	1324798	1374573	2
Inversion	Chr2	2430367	2518804	LOC_Os02g05244
Inversion	Chr5	27517603	27602330

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	9639739	Chr6	1887504	LOC_Os06g04399
Translocation	Chr3	36162991	Chr2	35845355

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