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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	11852717	C-T	HOMO	INTERGENIC
SBS	Chr11	1155868	T-G	HOMO	INTRON
SBS	Chr11	1342345	T-C	HOMO	INTRON
SBS	Chr12	12989616	G-A	HET	UTR_3_PRIME
SBS	Chr12	21264339	G-A	HET	INTERGENIC
SBS	Chr2	14340152	C-T	HET	INTERGENIC
SBS	Chr2	23790706	T-A	HET	INTERGENIC
SBS	Chr2	44740	T-C	HET	INTERGENIC
SBS	Chr3	19244369	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os03g33650
SBS	Chr3	33551663	G-A	HOMO	INTERGENIC
SBS	Chr4	14627952	A-C	HOMO	INTERGENIC
SBS	Chr4	20621218	A-T	HET	INTRON
SBS	Chr4	32551330	C-T	HET	INTERGENIC
SBS	Chr4	32551333	C-T	HET	INTERGENIC
SBS	Chr4	3453203	G-A	HET	INTERGENIC
SBS	Chr5	3657891	A-T	HET	INTRON
SBS	Chr5	4688809	G-T	HET	INTERGENIC
SBS	Chr6	24386335	G-C	HET	INTERGENIC
SBS	Chr6	4390164	T-A	HOMO	INTRON
SBS	Chr7	17903742	G-A	HOMO	INTRON
SBS	Chr7	26674664	G-T	HOMO	INTRON
SBS	Chr8	11940519	G-T	HET	INTRON
SBS	Chr8	12561366	G-T	HET	INTERGENIC
SBS	Chr8	12640248	C-T	HET	INTERGENIC
SBS	Chr8	24932830	G-A	HET	INTRON
SBS	Chr8	7181105	C-A	HET	INTERGENIC
SBS	Chr9	16314430	A-T	HET	INTERGENIC
SBS	Chr9	19540355	C-T	HOMO	INTRON
SBS	Chr9	20401299	T-C	HOMO	INTERGENIC
SBS	Chr9	20581823	T-C	HOMO	INTERGENIC
SBS	Chr9	21859643	T-C	HOMO	INTERGENIC

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	1569228	1569231	3
Deletion	Chr5	8854001	9111000	257000	43
Deletion	Chr5	11126001	11364000	238000	36
Deletion	Chr5	11370001	11453000	83000	11
Deletion	Chr5	11463001	12008000	545000	77
Deletion	Chr9	13613823	13613832	9	LOC_Os09g23050
Deletion	Chr6	13838988	13838990	2	LOC_Os06g23684
Deletion	Chr11	15071189	15071191	2
Deletion	Chr5	16106778	16107103	325
Deletion	Chr12	22106787	22106788	1
Deletion	Chr3	30710687	30710699	12
Deletion	Chr2	31307366	31307370	4	LOC_Os02g51164
Deletion	Chr4	34340580	34340585	5
Deletion	Chr1	43059695	43059699	4

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	10583202	10583202	1
Insertion	Chr12	514165	514171	7
Insertion	Chr2	26188425	26188426	2
Insertion	Chr4	14533878	14533878	1
Insertion	Chr4	16636422	16636422	1
Insertion	Chr7	11351622	11351624	3
Insertion	Chr7	1455532	1455543	12

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	18371892	20982187	LOC_Os02g30810

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	5291506	Chr6	12066008
Translocation	Chr7	18666887	Chr5	16106784
Translocation	Chr10	20341182	Chr3	4087373	2

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