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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	22967311	T-C	HET	INTERGENIC
SBS	Chr1	25395625	G-T	HET	INTERGENIC
SBS	Chr1	26588422	C-A	HET	INTERGENIC
SBS	Chr1	29857391	G-T	HOMO	INTERGENIC
SBS	Chr1	9075944	G-A	HET	INTRON
SBS	Chr1	9075945	G-A	HET	INTRON
SBS	Chr10	9797977	A-G	HOMO	INTRON
SBS	Chr12	15943162	T-G	HOMO	INTERGENIC
SBS	Chr12	20323249	T-A	HOMO	INTERGENIC
SBS	Chr12	5464831	T-A	HET	INTERGENIC
SBS	Chr2	30212678	T-A	HOMO	INTERGENIC
SBS	Chr3	25626691	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr3	29419488	C-A	HOMO	INTERGENIC
SBS	Chr3	33340141	T-A	HET	INTERGENIC
SBS	Chr4	20648675	G-T	HET	INTERGENIC
SBS	Chr4	20957121	C-T	HET	INTERGENIC
SBS	Chr4	7469520	G-A	HOMO	INTERGENIC
SBS	Chr5	1139613	T-G	HOMO	INTRON
SBS	Chr5	25827258	G-T	HOMO	INTERGENIC
SBS	Chr5	578279	G-C	HOMO	INTRON
SBS	Chr6	10830504	T-A	HET	INTERGENIC
SBS	Chr6	12584088	C-T	HET	INTERGENIC
SBS	Chr6	14309308	G-T	HET	INTRON
SBS	Chr6	15727156	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g27770
SBS	Chr6	15727157	C-A	HET	SYNONYMOUS_CODING
SBS	Chr6	17528805	A-G	HET	INTERGENIC
SBS	Chr6	20856139	T-C	HET	INTERGENIC
SBS	Chr6	21480165	A-T	HET	INTRON
SBS	Chr6	30812054	C-T	HET	INTRON
SBS	Chr7	21461588	T-A	HET	INTERGENIC
SBS	Chr7	6049735	C-T	HET	INTERGENIC
SBS	Chr8	19404033	C-T	HET	INTERGENIC
SBS	Chr8	3588261	C-T	HET	INTERGENIC
SBS	Chr9	22714759	G-A	HOMO	INTRON

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	427627	427635	8	LOC_Os10g01640
Deletion	Chr7	3758824	3758825	1
Deletion	Chr2	4004866	4004869	3
Deletion	Chr11	5768413	5768425	12
Deletion	Chr6	6004916	6004925	9
Deletion	Chr6	8121136	8121148	12
Deletion	Chr1	9146283	9146289	6
Deletion	Chr5	9786034	9786037	3	LOC_Os05g17120
Deletion	Chr3	11687622	11687633	11
Deletion	Chr1	12697406	12697428	22
Deletion	Chr9	13891187	13891188	1
Deletion	Chr5	16688795	16688796	1
Deletion	Chr6	20291799	20291809	10
Deletion	Chr3	27539227	27539228	1
Deletion	Chr4	30059714	30059715	1
Deletion	Chr4	31050255	31050261	6
Deletion	Chr1	42457459	42457463	4	LOC_Os01g73240
Deletion	Chr1	42741489	42741492	3

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	6154084	6154087	4
Insertion	Chr10	2528641	2528642	2
Insertion	Chr4	20701596	20701597	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	4005494	4158751	LOC_Os12g07900
Inversion	Chr6	16606700	19826785	2
Inversion	Chr6	19826766	29158903	LOC_Os06g34040

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	20723885	Chr3	25474338	LOC_Os11g35350

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