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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	20633267	C-A	HET	INTERGENIC
SBS	Chr10	20633268	G-A	HET	INTERGENIC
SBS	Chr11	15577700	C-A	HET	INTERGENIC
SBS	Chr11	16651876	A-G	HET	INTRON
SBS	Chr11	21083841	G-T	HET	INTERGENIC
SBS	Chr12	8130661	A-T	HET	INTERGENIC
SBS	Chr12	8439387	A-T	HET	INTRON
SBS	Chr2	11729332	A-T	HET	INTRON
SBS	Chr2	166501	C-T	HET	INTERGENIC
SBS	Chr2	28034651	G-A	HOMO	INTERGENIC
SBS	Chr2	29324400	G-A	HOMO	INTERGENIC
SBS	Chr2	33086347	C-A	HET	INTRON
SBS	Chr4	24872638	C-T	HET	INTERGENIC
SBS	Chr5	20065356	C-G	HET	SYNONYMOUS_CODING
SBS	Chr5	487689	A-G	HET	INTRON
SBS	Chr6	12281159	G-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g21240
SBS	Chr6	15203547	T-G	HET	INTERGENIC
SBS	Chr6	27804593	G-A	HOMO	INTERGENIC
SBS	Chr7	14065339	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os07g24730
SBS	Chr7	22734372	A-G	HET	INTERGENIC
SBS	Chr7	6419495	T-C	HET	INTERGENIC
SBS	Chr7	6419496	A-T	HET	INTERGENIC
SBS	Chr8	25162140	A-G	HOMO	INTERGENIC
SBS	Chr8	27378330	C-T	HET	INTRON
SBS	Chr9	14352625	C-T	HET	INTRON
SBS	Chr9	1795351	C-T	HET	SYNONYMOUS_CODING
SBS	Chr9	21840543	T-A	HOMO	INTERGENIC
SBS	Chr9	22341722	C-A	HET	INTRON

Deletions: 24

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	2378130	2378141	11
Deletion	Chr5	3801223	3801224	1
Deletion	Chr6	4006726	4006727	1
Deletion	Chr9	5591575	5591580	5
Deletion	Chr11	7980331	7987197	6866	LOC_Os11g14260
Deletion	Chr1	10087787	10087790	3
Deletion	Chr2	11655883	11655902	19
Deletion	Chr12	12507842	12507860	18
Deletion	Chr7	13838458	13838473	15
Deletion	Chr7	16255740	16255741	1
Deletion	Chr8	18337746	18337758	12
Deletion	Chr1	18940213	18940214	1
Deletion	Chr1	18999176	19002917	3741
Deletion	Chr6	21660554	21660564	10
Deletion	Chr4	24043582	24043588	6
Deletion	Chr8	25600456	25600457	1	LOC_Os08g40460
Deletion	Chr7	26050219	26050235	16
Deletion	Chr7	26285530	26285540	10
Deletion	Chr5	26291227	26291231	4
Deletion	Chr8	27057620	27057621	1
Deletion	Chr5	27484918	27484929	11
Deletion	Chr2	28195229	28195251	22
Deletion	Chr2	29664243	29664245	2	LOC_Os02g48440
Deletion	Chr2	33447572	33447575	3

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	25586548	25586549	2
Insertion	Chr7	17560179	17560180	2

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	1286595	1358782	2
Inversion	Chr10	1286606	1317649	LOC_Os10g03070
Inversion	Chr8	8568836	8811678
Inversion	Chr2	24844804	25054919	LOC_Os02g41710

No Translocation

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