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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	6517416	G-A	HOMO	INTERGENIC
SBS	Chr1	6517422	C-T	HOMO	INTERGENIC
SBS	Chr1	18895994	T-A	HOMO	INTERGENIC
SBS	Chr1	19340113	G-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os01g34950
SBS	Chr1	19601758	T-C	HET	INTERGENIC
SBS	Chr1	41746755	T-G	HET	INTERGENIC
SBS	Chr2	2202603	T-C	HET	INTERGENIC
SBS	Chr5	1513392	G-A	HET	INTERGENIC
SBS	Chr5	2346723	C-A	HET	SYNONYMOUS_CODING
SBS	Chr5	3931712	T-A	HET	INTERGENIC
SBS	Chr5	9935179	C-T	HET	INTRON
SBS	Chr5	28503079	T-A	HET	INTERGENIC
SBS	Chr6	6420981	C-T	HOMO	INTERGENIC
SBS	Chr6	11413363	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os06g19930
SBS	Chr7	6457203	A-G	HET	INTRON
SBS	Chr7	6457208	A-C	HET	INTRON
SBS	Chr7	22502805	A-G	HET	INTERGENIC
SBS	Chr7	23436823	C-T	HET	INTRON
SBS	Chr9	3318580	G-T	HET	INTRON
SBS	Chr9	4091276	C-T	HOMO	INTRON
SBS	Chr10	11852717	C-T	HOMO	INTERGENIC
SBS	Chr10	22432509	G-T	HOMO	INTERGENIC
SBS	Chr12	5809042	C-A	HET	INTRON
SBS	Chr12	6918485	C-T	HOMO	UTR_3_PRIME
SBS	Chr12	15845984	C-T	HOMO	INTERGENIC
SBS	Chr12	15845985	C-T	HOMO	INTERGENIC
SBS	Chr12	16938955	T-C	HOMO	INTERGENIC
SBS	Chr12	18094897	T-C	HOMO	INTERGENIC
SBS	Chr12	18158355	G-A	HOMO	INTERGENIC

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	3433954	3433955	1
Deletion	Chr7	3788780	3788784	4
Deletion	Chr11	4831847	4831849	2	LOC_Os11g09100
Deletion	Chr1	7138008	7138015	7
Deletion	Chr10	7335496	7335992	496	LOC_Os10g13550
Deletion	Chr11	8860013	8860018	5
Deletion	Chr12	10086460	10086465	5
Deletion	Chr7	10301137	10301140	3
Deletion	Chr6	12810092	12810093	1
Deletion	Chr10	14507483	14567889	60406	7
Deletion	Chr5	14764450	14764459	9
Deletion	Chr10	15188725	15188726	1
Deletion	Chr8	15818994	15819022	28
Deletion	Chr5	16852956	16852970	14
Deletion	Chr8	19142195	19142200	5	LOC_Os08g31000
Deletion	Chr2	21380820	21380828	8
Deletion	Chr7	22829055	22829057	2	LOC_Os07g38070
Deletion	Chr2	23370725	23370731	6	LOC_Os02g38660
Deletion	Chr5	25478001	25592000	114000	18
Deletion	Chr5	25606001	25743000	137000	23
Deletion	Chr4	26716819	26716828	9	LOC_Os04g45200
Deletion	Chr7	29133495	29133547	52
Deletion	Chr1	41773216	41773218	2

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	5821633	5821633	1
Insertion	Chr7	26815280	26815280	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	14507499	14534594	2
Inversion	Chr1	27086569	27273582	2

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	5526220	Chr2	17061963

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