Search Results

Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	31114562	T-A	HET	INTRON
SBS	Chr2	1705888	A-T	HOMO	INTERGENIC
SBS	Chr2	1705895	T-A	HOMO	INTERGENIC
SBS	Chr2	2072279	A-G	HET	INTRON
SBS	Chr2	2072281	G-T	HET	INTRON
SBS	Chr4	18102285	A-T	HET	INTERGENIC
SBS	Chr5	8018677	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g14280
SBS	Chr5	9894278	T-A	HET	INTERGENIC
SBS	Chr5	26904105	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr6	11346435	A-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g19854
SBS	Chr6	29717888	G-A	HET	INTERGENIC
SBS	Chr7	8543616	G-A	HOMO	INTERGENIC
SBS	Chr8	2646525	G-T	HET	INTERGENIC
SBS	Chr8	2646527	A-G	HET	INTERGENIC
SBS	Chr8	8117334	T-A	HET	INTERGENIC
SBS	Chr8	17507277	G-A	HET	INTERGENIC
SBS	Chr8	24503083	C-T	HOMO	INTERGENIC
SBS	Chr9	6512310	C-A	HET	INTERGENIC
SBS	Chr9	13361407	T-A	HOMO	INTERGENIC
SBS	Chr9	20947062	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os09g36300
SBS	Chr10	6427682	G-A	HOMO	INTERGENIC
SBS	Chr11	2961709	T-A	HET	INTRON
SBS	Chr11	11679980	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os11g20220
SBS	Chr11	11698004	G-A	HET	INTRON
SBS	Chr11	13049778	C-T	HET	INTERGENIC
SBS	Chr11	20048796	T-A	HET	INTRON
SBS	Chr12	3560091	G-T	HET	INTERGENIC
SBS	Chr12	8611807	C-A	HOMO	INTERGENIC
SBS	Chr12	9214881	A-T	HOMO	INTERGENIC
SBS	Chr12	10506735	G-T	HET	INTERGENIC
SBS	Chr12	17587628	A-T	HET	INTERGENIC
SBS	Chr12	19677644	A-G	HET	INTERGENIC

Deletions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	234561	234563	2	LOC_Os09g01270
Deletion	Chr4	515446	515447	1
Deletion	Chr12	681416	681418	2
Deletion	Chr8	757603	861006	103403	9
Deletion	Chr2	1218401	1218402	1
Deletion	Chr8	3302800	3302811	11	LOC_Os08g06050
Deletion	Chr11	3598315	3598319	4
Deletion	Chr3	4706592	4706630	38
Deletion	Chr3	4769104	4769468	364	LOC_Os03g09150
Deletion	Chr10	6667818	6667827	9	LOC_Os10g12010
Deletion	Chr12	7233454	7233458	4
Deletion	Chr5	8020422	8020424	2
Deletion	Chr8	8242937	8242946	9
Deletion	Chr5	8914253	8914281	28
Deletion	Chr11	10191779	10191785	6	LOC_Os11g18110
Deletion	Chr9	10928028	10928040	12
Deletion	Chr1	11558606	11558612	6
Deletion	Chr5	11626212	11626223	11
Deletion	Chr9	12233926	12233944	18
Deletion	Chr12	12888043	12888047	4	LOC_Os12g22830
Deletion	Chr12	18285001	18299000	14000	2
Deletion	Chr9	19416336	19416359	23	LOC_Os09g32526
Deletion	Chr12	20315629	20315632	3
Deletion	Chr1	20926925	20926944	19
Deletion	Chr9	21333129	21333136	7
Deletion	Chr5	21397861	21397889	28
Deletion	Chr7	22950265	22950266	1
Deletion	Chr2	23534042	23534059	17

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	35638525	35638528	4
Insertion	Chr5	763686	763687	2	LOC_Os05g02350
Insertion	Chr4	11453022	11453022	1	LOC_Os04g20474

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	14470403	14908122
Inversion	Chr12	14470425	14910922
Inversion	Chr12	20282284	20340528	LOC_Os12g33690
Inversion	Chr4	28333394	28407754
Inversion	Chr4	28407765	29429315

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	33842	Chr3	4769151	LOC_Os03g09150
Translocation	Chr12	1631173	Chr11	10418312	LOC_Os12g03940
Translocation	Chr10	2330065	Chr4	6525983	LOC_Os04g11900
Translocation	Chr12	8840820	Chr7	19482316
Translocation	Chr11	17927409	Chr8	6186159
Translocation	Chr11	19832387	Chr8	15705094
Translocation	Chr6	30079688	Chr5	27486197	2
Translocation	Chr6	30083681	Chr5	27486192	LOC_Os05g47950

Main menu