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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10026545	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g17430
SBS	Chr1	17007245	G-A	HET	INTERGENIC
SBS	Chr1	26701032	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g46810
SBS	Chr10	18124939	C-T	HOMO	INTERGENIC
SBS	Chr10	756604	C-A	HET	INTERGENIC
SBS	Chr11	1024158	G-A	HET	INTRON
SBS	Chr11	1178911	A-T	HOMO	INTERGENIC
SBS	Chr11	1178925	C-T	HOMO	INTERGENIC
SBS	Chr11	23741887	C-G	HOMO	INTERGENIC
SBS	Chr12	26339169	C-G	HET	INTERGENIC
SBS	Chr12	7398962	G-A	HET	INTERGENIC
SBS	Chr2	26397191	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g43750
SBS	Chr2	29694454	G-T	HET	INTERGENIC
SBS	Chr2	7740074	T-A	HET	INTERGENIC
SBS	Chr3	27447522	T-A	HOMO	INTERGENIC
SBS	Chr5	7537819	A-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g13590
SBS	Chr6	15883557	G-T	HET	INTRON
SBS	Chr6	21741884	C-T	HET	SYNONYMOUS_CODING
SBS	Chr7	28003071	G-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os07g46846
SBS	Chr8	1140981	C-A	HET	INTERGENIC
SBS	Chr8	20005840	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os08g32290
SBS	Chr8	243174	T-A	HOMO	INTERGENIC

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	4561897	4561901	4	LOC_Os05g08360
Deletion	Chr1	18140706	18140712	6
Deletion	Chr6	19309675	19309676	1
Deletion	Chr6	19482953	19483003	50
Deletion	Chr7	19664101	19664118	17	LOC_Os07g32890
Deletion	Chr6	19741251	19741258	7
Deletion	Chr2	22501814	22501850	36
Deletion	Chr11	24027960	24027963	3
Deletion	Chr6	25283001	25327000	44000	11
Deletion	Chr3	27564028	27564036	8
Deletion	Chr6	30066567	30066568	1	LOC_Os06g49690
Deletion	Chr3	35032123	35032125	2

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	23208034	23208036	3
Insertion	Chr12	18950870	18950870	1
Insertion	Chr5	22032455	22032469	15
Insertion	Chr7	6098389	6098389	1
Insertion	Chr8	16701441	16701442	2

No Inversion

No Translocation

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