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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	18364286	C-T	HOMO	INTERGENIC
SBS	Chr1	18364287	A-T	HOMO	INTERGENIC
SBS	Chr1	21874421	G-A	HOMO	INTERGENIC
SBS	Chr1	27166095	T-A	HET	INTERGENIC
SBS	Chr1	8853433	A-G	HET	INTERGENIC
SBS	Chr10	17667783	T-A	HET	INTERGENIC
SBS	Chr10	23052647	C-G	HOMO	INTRON
SBS	Chr12	14998477	G-A	HOMO	STOP_GAINED	LOC_Os12g25850
SBS	Chr12	18208723	A-C	HET	INTERGENIC
SBS	Chr12	22459630	T-C	HET	INTRON
SBS	Chr12	24150262	G-T	HOMO	SYNONYMOUS_CODING
SBS	Chr12	24150263	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os12g39230
SBS	Chr12	26357566	T-C	HET	INTERGENIC
SBS	Chr2	25535620	A-G	HET	INTERGENIC
SBS	Chr3	21805895	G-A	HOMO	INTERGENIC
SBS	Chr6	14519803	C-T	HET	INTERGENIC
SBS	Chr6	22268365	G-A	HET	INTRON
SBS	Chr6	25780536	C-G	HET	INTERGENIC
SBS	Chr6	26728589	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g44290
SBS	Chr6	5955735	G-A	HET	INTRON
SBS	Chr6	8001029	T-C	HET	INTRON
SBS	Chr8	17596536	A-G	HET	SYNONYMOUS_CODING
SBS	Chr8	3305710	C-G	HOMO	INTERGENIC
SBS	Chr8	8807498	C-T	HET	INTERGENIC
SBS	Chr9	16533606	C-A	HET	INTRON
SBS	Chr9	17620178	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g28970

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	1016182	1016184	2
Deletion	Chr5	1498320	1498321	1	LOC_Os05g03540
Deletion	Chr6	2355147	2355148	1
Deletion	Chr11	2859623	2859627	4
Deletion	Chr5	4413780	4544703	130923	23
Deletion	Chr6	5624862	5624876	14	LOC_Os06g10770
Deletion	Chr5	6637119	6637128	9
Deletion	Chr5	9270449	10346086	1075637	156
Deletion	Chr1	11268322	11268323	1
Deletion	Chr4	13172557	13172584	27
Deletion	Chr4	13599345	13599354	9	LOC_Os04g23799
Deletion	Chr10	18631602	18631604	2	LOC_Os10g34902
Deletion	Chr4	18978405	18978408	3
Deletion	Chr4	20245371	20245380	9	LOC_Os04g33470
Deletion	Chr3	20822716	20845584	22868	4
Deletion	Chr12	23696849	23696857	8
Deletion	Chr6	25831441	25831442	1
Deletion	Chr6	27709330	27709824	494	LOC_Os06g45800
Deletion	Chr6	27999745	27999754	9	LOC_Os06g46210
Deletion	Chr1	31553605	31553606	1	LOC_Os01g54860
Deletion	Chr3	35221274	35221279	5	LOC_Os03g62180
Deletion	Chr1	40135533	40135564	31	LOC_Os01g69060

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr4	20356376	20356377	2
Insertion	Chr7	6369316	6369317	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	5655004	6973862

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	27709819	Chr5	18708031

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