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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	13126198	C-T	HET	INTERGENIC
SBS	Chr1	1950405	C-T	HET	INTERGENIC
SBS	Chr1	20315789	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g36610
SBS	Chr1	27454424	G-T	HET	SYNONYMOUS_CODING
SBS	Chr1	41182089	C-A	HET	INTERGENIC
SBS	Chr10	19418877	C-T	HOMO	INTERGENIC
SBS	Chr11	1902317	C-T	HET	INTRON
SBS	Chr11	23052143	T-A	HET	INTERGENIC
SBS	Chr12	4520779	G-C	HET	INTERGENIC
SBS	Chr2	21400612	T-C	HOMO	SYNONYMOUS_CODING
SBS	Chr2	27437745	G-T	HET	INTRON
SBS	Chr2	27437749	T-A	HET	INTRON
SBS	Chr3	10944503	T-A	HOMO	INTRON
SBS	Chr3	14962517	T-C	HET	INTERGENIC
SBS	Chr4	13436805	C-T	HOMO	INTRON
SBS	Chr4	23297364	A-T	HOMO	INTRON
SBS	Chr4	33086872	T-G	HET	INTERGENIC
SBS	Chr6	16851126	C-A	HET	INTERGENIC
SBS	Chr7	5275609	T-G	HET	INTERGENIC
SBS	Chr8	10108881	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g16490
SBS	Chr8	4898027	C-G	HET	INTERGENIC
SBS	Chr9	20140923	T-G	HET	INTERGENIC
SBS	Chr9	6735634	G-C	HET	INTERGENIC
SBS	Chr9	845065	G-C	HET	INTRON

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	3789091	3789101	10
Deletion	Chr7	4308325	4308327	2
Deletion	Chr12	8920311	8920321	10
Deletion	Chr9	14615347	14615415	68
Deletion	Chr11	17923001	17998000	75000	13
Deletion	Chr11	18020316	18020354	38	LOC_Os11g30970
Deletion	Chr8	18458477	18458478	1
Deletion	Chr2	22473865	22473872	7
Deletion	Chr3	23569067	23569069	2
Deletion	Chr11	23849445	23849446	1
Deletion	Chr6	26023523	26023527	4
Deletion	Chr2	26156355	26156381	26	LOC_Os02g43350
Deletion	Chr3	28899759	28899764	5
Deletion	Chr6	29368815	29368816	1	LOC_Os06g48534
Deletion	Chr1	29871538	29938520	66982	9
Deletion	Chr2	31168115	31168124	9
Deletion	Chr1	39579815	39579823	8	LOC_Os01g68070

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr12	9490478	9490479	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	7576031	9144017
Inversion	Chr4	23071417	23299812
Inversion	Chr1	29846416	29938520	LOC_Os01g51920

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	6845738	Chr6	22827530
Translocation	Chr12	15670080	Chr1	2952814	2

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