Search Results

Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	752790	T-A	HOMO	UTR_3_PRIME
SBS	Chr1	12740415	G-A	HET	INTERGENIC
SBS	Chr1	20223548	G-A	HET	INTRON
SBS	Chr2	7253270	T-A	HOMO	INTERGENIC
SBS	Chr2	12779420	T-A	HOMO	INTERGENIC
SBS	Chr2	12779421	T-A	HOMO	INTERGENIC
SBS	Chr2	19792347	C-T	HET	INTRON
SBS	Chr3	6141897	T-C	HET	INTRON
SBS	Chr3	9465642	A-C	HET	INTERGENIC
SBS	Chr3	10105442	G-A	HET	INTERGENIC
SBS	Chr3	16767038	G-A	HET	INTERGENIC
SBS	Chr3	16767039	G-T	HET	INTERGENIC
SBS	Chr3	26296480	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g46480
SBS	Chr3	31620691	T-C	HET	INTERGENIC
SBS	Chr3	34355514	G-A	HOMO	INTERGENIC
SBS	Chr3	34911279	G-A	HET	INTRON
SBS	Chr4	29366995	C-T	HET	UTR_3_PRIME
SBS	Chr4	33511067	G-A	HOMO	INTERGENIC
SBS	Chr5	26500796	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr6	1257507	G-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g03300
SBS	Chr6	3292372	G-A	HOMO	INTERGENIC
SBS	Chr7	2579488	C-T	HET	INTERGENIC
SBS	Chr7	10907450	G-A	HET	INTERGENIC
SBS	Chr9	1952422	T-C	HET	INTERGENIC
SBS	Chr10	4877215	A-C	HET	INTERGENIC
SBS	Chr10	11036875	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g21560
SBS	Chr10	19723648	T-G	HOMO	INTERGENIC
SBS	Chr11	8358715	C-T	HET	INTRON
SBS	Chr11	14164428	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g24840
SBS	Chr11	20965287	A-G	HET	INTERGENIC
SBS	Chr11	21862828	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g37040
SBS	Chr12	19375534	G-C	HET	INTRON
SBS	Chr12	26806715	A-G	HOMO	INTERGENIC

Deletions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	903656	903661	5
Deletion	Chr6	1453901	1453907	6
Deletion	Chr9	4595040	4595041	1	LOC_Os09g08720
Deletion	Chr3	5420448	5420455	7
Deletion	Chr8	7597222	7597223	1
Deletion	Chr4	11010054	11010059	5
Deletion	Chr10	11209388	11209389	1
Deletion	Chr7	12753243	12753275	32	LOC_Os07g22640
Deletion	Chr2	12797543	12797544	1
Deletion	Chr5	14497142	14497144	2
Deletion	Chr4	15231823	15231828	5	LOC_Os04g26130
Deletion	Chr12	17199037	17199040	3
Deletion	Chr11	17601947	17601954	7
Deletion	Chr4	19043246	19043258	12
Deletion	Chr1	20471877	20471879	2
Deletion	Chr5	20866873	20866874	1
Deletion	Chr6	20943474	20943475	1	LOC_Os06g35900
Deletion	Chr4	22013932	22013948	16
Deletion	Chr11	22028691	22028692	1
Deletion	Chr3	24178123	24178128	5
Deletion	Chr3	24278249	24278260	11
Deletion	Chr11	25015314	25015315	1
Deletion	Chr3	26725857	26725858	1
Deletion	Chr12	27144971	27144973	2
Deletion	Chr1	28024032	28024035	3
Deletion	Chr2	29205949	29205951	2
Deletion	Chr1	36563411	36563416	5

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr6	3255931	3255932	2
Insertion	Chr2	12353499	12353502	4
Insertion	Chr7	8045906	8045909	4
Insertion	Chr7	12793853	12793855	3
Insertion	Chr9	15125630	15125632	3
Insertion	Chr7	29563087	29563087	1

No Inversion

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	13630444	Chr1	1727999
Translocation	Chr9	13630465	Chr1	1722658
Translocation	Chr10	13993151	Chr9	20287935
Translocation	Chr12	18085182	Chr6	18145659	LOC_Os06g31210
Translocation	Chr12	19818834	Chr6	14832852	2
Translocation	Chr11	22169093	Chr2	10151790	LOC_Os11g37540
Translocation	Chr2	30009114	Chr1	1728003
Translocation	Chr2	30014020	Chr1	1722602	LOC_Os02g49080

Main menu