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Mutant Information

Variant Information

Single base substitutions: 23

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1230713	G-T	HET	INTERGENIC
SBS	Chr1	3724224	C-T	HOMO	INTERGENIC
SBS	Chr10	1932365	C-G	HET	INTERGENIC
SBS	Chr10	22808911	A-C	HET	SYNONYMOUS_CODING
SBS	Chr10	4739233	G-T	HET	INTRON
SBS	Chr11	20785086	T-C	HET	INTERGENIC
SBS	Chr11	20981224	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g35740
SBS	Chr11	24716430	C-T	HET	STOP_GAINED	LOC_Os11g41210
SBS	Chr12	13501546	A-G	HET	INTRON
SBS	Chr12	15613360	A-G	HET	SYNONYMOUS_CODING
SBS	Chr12	16542401	C-T	HET	INTERGENIC
SBS	Chr2	24170870	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr2	34745276	G-A	HOMO	INTERGENIC
SBS	Chr2	7317096	A-T	HOMO	INTRON
SBS	Chr3	18705483	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g32650
SBS	Chr3	8269706	T-C	HET	SYNONYMOUS_CODING
SBS	Chr4	10430105	G-T	HOMO	INTERGENIC
SBS	Chr4	23789074	A-T	HOMO	INTERGENIC
SBS	Chr5	1697357	G-A	HET	INTERGENIC
SBS	Chr6	9896600	T-A	HET	INTERGENIC
SBS	Chr7	14251511	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr7	7844806	C-T	HOMO	INTERGENIC
SBS	Chr9	6975109	A-T	HET	INTERGENIC

Deletions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	258033	258055	22
Deletion	Chr7	1236514	1236516	2
Deletion	Chr12	1996904	1996905	1
Deletion	Chr8	3436119	3436128	9	LOC_Os08g06230
Deletion	Chr7	4284547	4284562	15
Deletion	Chr8	5188616	5188618	2
Deletion	Chr4	5671722	5671723	1
Deletion	Chr1	6197948	6197956	8
Deletion	Chr10	6582624	6582626	2
Deletion	Chr9	7045825	7047208	1383	LOC_Os09g12350
Deletion	Chr8	7118001	7309000	191000	30
Deletion	Chr11	7438424	7438434	10	LOC_Os11g13570
Deletion	Chr5	10605891	10605908	17
Deletion	Chr7	14223812	14223818	6
Deletion	Chr9	14561794	14561796	2
Deletion	Chr7	15240153	15240168	15
Deletion	Chr6	15616126	15616130	4
Deletion	Chr3	16806370	16806371	1
Deletion	Chr10	18175216	18175219	3	LOC_Os10g34050
Deletion	Chr3	20492112	20492113	1
Deletion	Chr5	21642462	21642483	21
Deletion	Chr5	23101996	23101997	1	LOC_Os05g39380
Deletion	Chr12	23481871	23481875	4
Deletion	Chr3	24380846	24380857	11
Deletion	Chr4	26428130	26428132	2
Deletion	Chr11	28905601	28905608	7
Deletion	Chr1	31522997	31523000	3
Deletion	Chr1	37531422	37531427	5

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	13058136	13058136	1
Insertion	Chr12	10739685	10739686	2
Insertion	Chr2	13971561	13971562	2
Insertion	Chr5	10837772	10837773	2

No Inversion

No Translocation

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