Search Results

Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10647188	A-G	HOMO	INTERGENIC
SBS	Chr1	10647189	A-G	HOMO	INTERGENIC
SBS	Chr1	16077153	T-G	HET	INTERGENIC
SBS	Chr1	19324795	A-G	HET	INTERGENIC
SBS	Chr1	41564993	A-T	HET	INTRON
SBS	Chr2	1873775	C-A	HET	SYNONYMOUS_CODING
SBS	Chr2	2045777	T-A	HET	INTERGENIC
SBS	Chr2	5697056	T-A	HET	INTRON
SBS	Chr2	6988896	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os02g13140
SBS	Chr2	13996804	G-T	HET	INTERGENIC
SBS	Chr2	20261804	G-A	HOMO	INTERGENIC
SBS	Chr2	33173165	A-G	HOMO	SYNONYMOUS_CODING
SBS	Chr3	3203812	G-A	HET	INTRON
SBS	Chr3	3663140	C-A	HET	INTERGENIC
SBS	Chr3	28216393	C-T	HOMO	INTERGENIC
SBS	Chr3	31798319	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g55860
SBS	Chr4	2467471	G-A	HOMO	INTERGENIC
SBS	Chr4	2816039	G-T	HOMO	INTERGENIC
SBS	Chr4	10934008	G-A	HOMO	INTRON
SBS	Chr5	25099064	T-G	HOMO	INTERGENIC
SBS	Chr5	27733949	G-T	HET	UTR_3_PRIME
SBS	Chr6	27046256	C-T	HOMO	INTERGENIC
SBS	Chr7	466524	C-T	HOMO	INTERGENIC
SBS	Chr7	12914489	G-A	HOMO	INTERGENIC
SBS	Chr8	2629751	A-T	HET	INTERGENIC
SBS	Chr8	4696630	T-G	HOMO	UTR_3_PRIME
SBS	Chr8	12105397	T-C	HET	INTRON
SBS	Chr8	20096441	G-A	HET	INTRON
SBS	Chr9	4940287	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os09g09220
SBS	Chr9	10913480	T-C	HOMO	INTERGENIC
SBS	Chr10	12553367	C-A	HET	STOP_GAINED	LOC_Os10g24460
SBS	Chr10	15989614	G-A	HET	INTERGENIC
SBS	Chr11	8752101	G-A	HOMO	INTERGENIC
SBS	Chr11	10325938	G-A	HOMO	INTERGENIC
SBS	Chr12	14842048	A-G	HOMO	INTRON
SBS	Chr12	18162372	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr12	24217586	G-A	HET	SYNONYMOUS_CODING

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	582646	582657	11
Deletion	Chr4	1110680	1110685	5
Deletion	Chr2	1331609	1331617	8	LOC_Os02g03294
Deletion	Chr10	1664347	1664354	7
Deletion	Chr8	1713824	1714134	310	LOC_Os08g03620
Deletion	Chr4	2467351	2467361	10
Deletion	Chr4	2467460	2467461	1
Deletion	Chr8	2564990	2564993	3
Deletion	Chr11	4365717	4365732	15
Deletion	Chr1	5583071	5583072	1
Deletion	Chr2	5697048	5697050	2
Deletion	Chr5	5856113	5856115	2
Deletion	Chr10	8134776	8134790	14
Deletion	Chr2	9632029	9632033	4
Deletion	Chr1	17205463	17205466	3
Deletion	Chr8	19556383	19556384	1	LOC_Os08g31600
Deletion	Chr9	22150436	22150446	10	LOC_Os09g38490
Deletion	Chr3	23486877	23486905	28
Deletion	Chr11	23491481	23491482	1
Deletion	Chr2	25287257	25287273	16
Deletion	Chr4	28855674	28855675	1
Deletion	Chr1	39650709	39650714	5

Insertions: 10

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr4	25136045	25136045	1
Insertion	Chr6	7434766	7434766	1
Insertion	Chr8	4378407	4378408	2
Insertion	Chr11	4446716	4446717	2
Insertion	Chr11	17649881	17649882	2
Insertion	Chr1	2205708	2205711	4
Insertion	Chr5	21765747	21765750	4
Insertion	Chr11	19601932	19601934	3
Insertion	Chr12	295499	295499	1
Insertion	Chr5	24567932	24567932	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	24140121	34088386	LOC_Os03g43290
Inversion	Chr2	27281709	27486850

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	390632	Chr5	10086476
Translocation	Chr12	5786061	Chr6	24056708	LOC_Os12g10760
Translocation	Chr8	7958285	Chr6	16350800
Translocation	Chr11	8711924	Chr4	27912889
Translocation	Chr9	13753293	Chr8	23868697	LOC_Os09g23190
Translocation	Chr10	18185430	Chr9	3032305	LOC_Os10g34064
Translocation	Chr11	21589581	Chr1	14682303	LOC_Os01g25880

Main menu