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Mutant Information

SOS indicates the sequenced line is sterile and seeds from siblings are available.

Variant Information

Single base substitutions: 23

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	17699277	G-A	HET	INTERGENIC
SBS	Chr12	1040067	C-T	HET	INTERGENIC
SBS	Chr12	20986590	G-A	HET	INTERGENIC
SBS	Chr12	8285142	A-T	HET	INTERGENIC
SBS	Chr2	12730548	C-A	HET	INTERGENIC
SBS	Chr2	14643479	C-A	HET	INTERGENIC
SBS	Chr2	14643480	C-T	HET	INTERGENIC
SBS	Chr2	20791381	T-A	HET	INTERGENIC
SBS	Chr2	32047420	G-A	HOMO	INTERGENIC
SBS	Chr2	5437018	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g10340
SBS	Chr3	16819779	T-A	HET	INTERGENIC
SBS	Chr3	23655335	C-T	HET	INTERGENIC
SBS	Chr3	25049115	T-C	HET	INTRON
SBS	Chr3	35621376	G-A	HET	INTERGENIC
SBS	Chr4	14352887	A-T	HET	INTERGENIC
SBS	Chr4	20648675	G-T	HET	INTERGENIC
SBS	Chr5	24617669	A-T	HET	INTERGENIC
SBS	Chr6	28206399	G-A	HET	INTERGENIC
SBS	Chr7	19143226	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g32220
SBS	Chr7	9405576	G-T	HET	INTERGENIC
SBS	Chr8	6122885	C-T	HET	INTRON
SBS	Chr9	14974403	T-C	HET	INTRON
SBS	Chr9	9713483	C-T	HET	INTERGENIC

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	1640165	1640184	19
Deletion	Chr3	2974470	2974477	7
Deletion	Chr2	3428019	3428020	1
Deletion	Chr6	10879436	10879442	6
Deletion	Chr6	13872267	13872306	39
Deletion	Chr7	14219068	14219078	10
Deletion	Chr8	15899494	15899500	6
Deletion	Chr7	19120044	19120050	6
Deletion	Chr4	22061337	22061338	1
Deletion	Chr8	22930641	22930642	1	LOC_Os08g36380
Deletion	Chr4	23614845	23616886	2041	LOC_Os04g39629
Deletion	Chr6	24237661	24237663	2
Deletion	Chr1	24624001	24684000	60000	5
Deletion	Chr8	27462883	27462884	1
Deletion	Chr1	29014739	29014744	5
Deletion	Chr5	29328661	29328675	14

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	25763332	25763335	4
Insertion	Chr2	11779940	11779940	1
Insertion	Chr4	18330057	18330068	12
Insertion	Chr4	27542955	27542966	12
Insertion	Chr5	17289595	17289598	4
Insertion	Chr8	21418472	21418472	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	18761511	18937344
Inversion	Chr2	34833566	34940387	LOC_Os02g57060

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	13397050	Chr9	16355282
Translocation	Chr9	16923207	Chr4	13705022	LOC_Os09g27810
Translocation	Chr11	21128521	Chr4	857843
Translocation	Chr5	26507044	Chr2	34833571
Translocation	Chr5	26510266	Chr2	34940389	LOC_Os02g57060
Translocation	Chr5	29239054	Chr2	20716192	LOC_Os05g50950

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