Search Nipponbare
| Mutant Information |
|---|
| Mutant Name | FN966-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN966-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Mapping (Hover to Zoom-In) | 
|
| Variant Information |
|---|
Single base substitutions: 2
| Variant Type | Chromosome | Position | Change | Genotype | Effect | Gene Affected |
|---|---|---|---|---|---|---|
| SBS | Chr4 | 7804999 | C-T | HET | INTERGENIC | |
| SBS | Chr6 | 13933648 | T-A | HET | INTERGENIC |
No Deletion
Insertions: 2
| Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
|---|---|---|---|---|---|
| Insertion | Chr4 | 19690674 | 19690675 | 2 | LOC_Os04g32670 |
| Insertion | Chr8 | 9836169 | 9836170 | 2 |
Inversions: 1
| Variant Type | Chromosome | Position 1 | Position 2 | Number of Genes |
|---|---|---|---|---|
| Inversion | Chr11 | 677329 | 13216943 |
Translocations: 3
| Variant Type | Chromosome | Position 1 | Chromosome | Position 2 | Number of Genes |
|---|---|---|---|---|---|
| Translocation | Chr3 | 16632964 | Chr2 | 33429412 | |
| Translocation | Chr11 | 16997653 | Chr2 | 474831 | |
| Translocation | Chr11 | 27838285 | Chr7 | 27296787 | LOC_Os07g45720 |