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Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	12425279	G-A	HET
SBS	Chr1	24434471	C-A	HET
SBS	Chr1	24434472	T-C	HET
SBS	Chr1	25208184	G-A	HET	LOC_Os01g43980
SBS	Chr1	32586975	G-A	HET
SBS	Chr1	33408878	A-T	Homo
SBS	Chr1	615446	C-A	Homo
SBS	Chr1	8675325	C-T	Homo
SBS	Chr10	20163594	G-A	HET
SBS	Chr10	4934277	C-A	Homo
SBS	Chr10	5828868	C-T	Homo
SBS	Chr11	1660900	T-A	Homo
SBS	Chr11	3188762	C-A	Homo	LOC_Os11g06600
SBS	Chr12	15041970	G-T	Homo
SBS	Chr12	19475166	T-C	HET
SBS	Chr12	21395849	G-A	HET
SBS	Chr12	9176942	A-T	HET
SBS	Chr2	1439782	C-A	Homo	LOC_Os02g03540
SBS	Chr2	27898828	G-T	HET
SBS	Chr2	30841930	G-A	Homo	LOC_Os02g50490
SBS	Chr2	31475413	C-A	Homo
SBS	Chr3	14824322	G-A	HET
SBS	Chr3	15822283	C-T	HET
SBS	Chr3	1856463	C-T	Homo	LOC_Os03g04050
SBS	Chr3	36206741	C-T	Homo
SBS	Chr4	34304085	C-T	HET
SBS	Chr5	13231904	G-T	HET
SBS	Chr5	15602732	G-T	HET
SBS	Chr5	15602733	T-G	HET
SBS	Chr5	15602735	G-T	HET
SBS	Chr5	26972525	C-T	Homo
SBS	Chr7	26833401	T-A	Homo
SBS	Chr8	18314362	C-T	Homo
SBS	Chr8	28011079	G-A	Homo
SBS	Chr9	20433130	C-T	HET
SBS	Chr9	20960620	G-A	HET
SBS	Chr9	21523499	G-A	HET

Deletions: 31

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1156781	1156790	9
Deletion	Chr2	1893266	1893269	3	LOC_Os02g04290
Deletion	Chr11	2527554	2527560	6
Deletion	Chr8	7796524	7796529	5
Deletion	Chr8	8022343	8090797	68454	13
Deletion	Chr1	11566115	11582721	16606	2
Deletion	Chr1	12345732	12425181	79449	12
Deletion	Chr9	12467905	12467906	1
Deletion	Chr3	12473027	12473028	1
Deletion	Chr3	12739369	12739419	50
Deletion	Chr7	12943761	12943767	6	LOC_Os07g22960
Deletion	Chr9	12973540	12973541	1
Deletion	Chr5	15197269	15197270	1	LOC_Os05g26130
Deletion	Chr11	15223204	15223208	4
Deletion	Chr9	15955234	15955236	2
Deletion	Chr1	16083601	16761401	677800	105
Deletion	Chr6	17486319	17486326	7
Deletion	Chr9	20878010	20878017	7
Deletion	Chr3	21728700	21729596	896	LOC_Os03g39110
Deletion	Chr3	22001360	22001369	9
Deletion	Chr3	22142730	22142735	5
Deletion	Chr5	22480440	22480441	1
Deletion	Chr12	22565206	22565223	17
Deletion	Chr1	24190462	24190463	1
Deletion	Chr1	24633798	24633845	47
Deletion	Chr5	24692384	24692390	6
Deletion	Chr2	26239410	26239419	9
Deletion	Chr4	26566686	26566698	12
Deletion	Chr4	29663656	29663657	1
Deletion	Chr4	34913586	34913587	1
Deletion	Chr1	41552853	41552854	1	LOC_Os01g71710

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	12931417	12931420	4
Insertion	Chr2	32005986	32005986	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	5785630	7568592	LOC_Os04g10650
Inversion	Chr5	12311359	13185473
Inversion	Chr1	15506176	16083637	LOC_Os01g27770
Inversion	Chr10	20538762	21186893	LOC_Os10g38450
Inversion	Chr1	41166260	41784996	2

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2
Translocation	Chr8	8090789	Chr4	7568592
Translocation	Chr5	13185473	Chr10	22854711
Translocation	Chr3	21396036	Chr6	3745646

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