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Mutant Information

Variant Information

Single base substitutions: 9

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11590783	G-A	HET	INTERGENIC
SBS	Chr1	12636583	T-G	HET	UTR_3_PRIME
SBS	Chr2	11122352	G-A	HET	INTERGENIC
SBS	Chr3	29311816	G-C	HET	INTERGENIC
SBS	Chr4	12729259	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g22480
SBS	Chr5	19456316	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g33180
SBS	Chr7	21461588	T-A	HET	INTERGENIC
SBS	Chr9	17107715	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g28190
SBS	Chr11	8566338	G-A	HET	INTERGENIC

Deletions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	16815709	16817355	1646	2
Deletion	Chr1	18468772	18468773	1
Deletion	Chr1	21345709	21345721	12
Deletion	Chr4	30512013	30512014	1
Deletion	Chr1	31872262	31872291	29	LOC_Os01g55360
Deletion	Chr2	33974859	33974863	4
Deletion	Chr1	41488001	41560000	72000	12

Insertions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	19664236	19664274	39
Insertion	Chr1	21103425	21103444	20
Insertion	Chr1	19987054	19987065	12
Insertion	Chr11	5265068	5265077	10
Insertion	Chr8	3589750	3589759	10
Insertion	Chr2	19342066	19342071	6	LOC_Os02g32620
Insertion	Chr8	10065895	10065900	6
Insertion	Chr12	2611697	2611700	4
Insertion	Chr2	19802174	19802177	4
Insertion	Chr5	7424042	7424045	4
Insertion	Chr7	11785254	11785257	4
Insertion	Chr9	7261913	7261916	4
Insertion	Chr11	19576681	19576683	3
Insertion	Chr4	31490833	31490835	3
Insertion	Chr12	9490478	9490479	2
Insertion	Chr2	4646560	4646561	2
Insertion	Chr4	4909179	4909180	2
Insertion	Chr6	4375743	4375744	2	LOC_Os06g08740
Insertion	Chr6	23530241	23530242	2
Insertion	Chr8	16622730	16622731	2
Insertion	Chr9	17213099	17213100	2
Insertion	Chr10	22283519	22283519	1

No Inversion

No Translocation

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