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Mutant Information

Variant Information

Single base substitutions: 9

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11590783	G-A	HET	INTERGENIC
SBS	Chr1	12636583	T-G	HET	UTR_3_PRIME
SBS	Chr11	8566338	G-A	HET	INTERGENIC
SBS	Chr2	11122352	G-A	HET	INTERGENIC
SBS	Chr3	29311816	G-C	HET	INTERGENIC
SBS	Chr4	12729259	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g22480
SBS	Chr5	19456316	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g33180
SBS	Chr7	21461588	T-A	HET	INTERGENIC
SBS	Chr9	17107715	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g28190

Deletions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	16815709	16817355	1646	2
Deletion	Chr1	18468772	18468773	1
Deletion	Chr1	21345709	21345721	12
Deletion	Chr4	30512013	30512014	1
Deletion	Chr1	31872262	31872291	29	LOC_Os01g55360
Deletion	Chr2	33974859	33974863	4
Deletion	Chr1	41488001	41560000	72000	12

Insertions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	19987054	19987065	12
Insertion	Chr1	21103425	21103444	20
Insertion	Chr10	22283519	22283519	1
Insertion	Chr11	19576681	19576683	3
Insertion	Chr11	19664236	19664274	39
Insertion	Chr11	5265068	5265077	10
Insertion	Chr12	2611697	2611700	4
Insertion	Chr12	9490478	9490479	2
Insertion	Chr2	19342066	19342071	6	LOC_Os02g32620
Insertion	Chr2	19802174	19802177	4
Insertion	Chr2	4646560	4646561	2
Insertion	Chr4	31490833	31490835	3
Insertion	Chr4	4909179	4909180	2
Insertion	Chr5	7424042	7424045	4
Insertion	Chr6	23530241	23530242	2
Insertion	Chr6	4375743	4375744	2	LOC_Os06g08740
Insertion	Chr7	11785254	11785257	4
Insertion	Chr8	10065895	10065900	6
Insertion	Chr8	16622730	16622731	2
Insertion	Chr8	3589750	3589759	10
Insertion	Chr9	17213099	17213100	2
Insertion	Chr9	7261913	7261916	4

No Inversion

No Translocation

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