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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	1742675	C-A	HET
SBS	Chr1	41188545	C-A	HET	LOC_Os01g71190
SBS	Chr1	18175795	A-T	Homo
SBS	Chr1	21659218	T-G	Homo
SBS	Chr11	8546485	G-A	Homo	LOC_Os11g15170
SBS	Chr11	8704581	T-C	Homo
SBS	Chr2	12196674	C-T	HET
SBS	Chr2	20526845	G-T	HET	LOC_Os02g34300
SBS	Chr2	22695261	G-T	HET
SBS	Chr2	34333613	C-T	Homo
SBS	Chr3	4515737	G-T	HET
SBS	Chr4	11705119	T-A	HET	LOC_Os04g20850
SBS	Chr4	13526502	G-A	HET
SBS	Chr4	17385778	T-G	HET
SBS	Chr6	24787208	A-G	HET
SBS	Chr7	8238671	C-T	HET	LOC_Os07g14430
SBS	Chr7	10593847	A-T	HET
SBS	Chr7	19315707	C-T	HET
SBS	Chr7	20346319	T-A	HET
SBS	Chr8	4966370	G-A	Homo
SBS	Chr9	17503718	T-C	HET	LOC_Os09g28820
SBS	Chr9	20391063	G-T	HET
SBS	Chr9	20391064	A-T	HET
SBS	Chr9	9272818	A-T	Homo
SBS	Chr9	9801934	G-A	Homo

Deletions: 24

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	815589	815594	5
Deletion	Chr4	5200278	5200294	16	LOC_Os04g09700
Deletion	Chr10	6209685	6209698	13	LOC_Os10g11200
Deletion	Chr9	8365361	8365362	1	LOC_Os09g14120
Deletion	Chr9	8501946	8501956	10
Deletion	Chr7	9128722	9128736	14
Deletion	Chr8	9417084	9417086	2
Deletion	Chr4	15432054	15432055	1
Deletion	Chr7	16517256	16517264	8
Deletion	Chr5	16928491	16928497	6
Deletion	Chr10	17644170	17644187	17
Deletion	Chr10	17661661	17661674	13
Deletion	Chr12	19181769	19181798	29
Deletion	Chr12	20728406	20728407	1
Deletion	Chr3	21511827	21511835	8
Deletion	Chr10	21992039	21992041	2
Deletion	Chr2	22390901	22410401	19500	2
Deletion	Chr12	23960367	23960377	10
Deletion	Chr8	26169472	26169474	2
Deletion	Chr6	27321141	27321146	5
Deletion	Chr3	28884862	28884866	4
Deletion	Chr3	33966251	33966252	1
Deletion	Chr4	34906003	34906006	3	LOC_Os04g58700
Deletion	Chr1	40107058	40107060	2

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr4	457387	457387	1
Insertion	Chr4	32800354	32800355	2
Insertion	Chr4	8338683	8338683	1
Insertion	Chr5	29606460	29606460	1
Insertion	Chr5	15180062	15180063	2

No Inversion

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	21302915	Chr9	9168318	LOC_Os10g39800
Translocation	Chr2	22410404	Chr5	27676972	2
Translocation	Chr2	22461927	Chr4	34917752	2
Translocation	Chr2	22461938	Chr7	20415683	2

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