Search Results

Mutant Information

Mutant Name	FN_841-7-2 [Download]
Generation	M3
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN_841-7-2 Alignment File
Seed Availability	Yes [Order Seeds]
Mapping (Hover to Zoom-In)

Variant Information

Single base substitutions: 14

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	13428334	C-G	HET
SBS	Chr1	26456736	C-A	HET		LOC_Os01g46510
SBS	Chr1	26456739	T-A	HET		LOC_Os01g46510
SBS	Chr1	26456740	T-C	HET		LOC_Os01g46510
SBS	Chr1	39148546	A-G	HET
SBS	Chr11	14790344	A-G	Homo
SBS	Chr12	7202093	C-G	Homo		LOC_Os12g13000
SBS	Chr3	8625481	T-G	HET
SBS	Chr4	22827708	G-T	HET
SBS	Chr6	25091835	G-A	HET
SBS	Chr6	27245973	T-A	HET
SBS	Chr6	6896038	A-T	Homo
SBS	Chr7	21826249	C-T	HET
SBS	Chr7	6173169	G-C	Homo

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	132764	132780	16
Deletion	Chr9	2354701	2519901	165200	29
Deletion	Chr3	8249223	8249227	4	LOC_Os03g15100
Deletion	Chr1	8476423	8476438	15
Deletion	Chr9	13751655	13751661	6	LOC_Os09g23190
Deletion	Chr11	17317474	17317477	3
Deletion	Chr8	21658195	21658238	43
Deletion	Chr8	24278937	24278938	1
Deletion	Chr1	26580059	26580080	21
Deletion	Chr11	27805446	27805447	1
Deletion	Chr4	28040350	28040351	1
Deletion	Chr5	29631598	29631613	15

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	1879883	1879883	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	25014830	26063599	LOC_Os01g45880

No Translocation