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Mutant Information

Variant Information

Single base substitutions: 43

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	41212755	T-C	HET
SBS	Chr1	42395190	T-A	HET
SBS	Chr1	18008751	C-T	Homo
SBS	Chr1	42029784	T-A	Homo
SBS	Chr1	42029785	A-T	Homo
SBS	Chr10	10263497	T-C	HET	LOC_Os10g20410
SBS	Chr10	7042399	C-T	Homo
SBS	Chr10	21302577	A-T	Homo
SBS	Chr11	8589748	T-C	HET	LOC_Os11g15220
SBS	Chr11	20140734	G-C	HET
SBS	Chr11	20509750	G-A	HET
SBS	Chr11	22143392	T-G	HET
SBS	Chr12	23638909	T-A	HET
SBS	Chr12	24137600	G-A	HET
SBS	Chr2	15548522	C-T	HET
SBS	Chr2	28818316	G-A	Homo
SBS	Chr3	6830077	G-A	HET
SBS	Chr3	18878220	G-A	HET
SBS	Chr3	32295029	A-G	HET
SBS	Chr3	4002085	C-T	Homo
SBS	Chr4	211572	T-C	HET
SBS	Chr4	8378846	T-G	Homo
SBS	Chr4	35402310	C-T	Homo
SBS	Chr5	25383252	T-G	HET
SBS	Chr5	29902267	C-G	HET
SBS	Chr6	28939790	A-G	HET
SBS	Chr6	1285195	A-T	Homo
SBS	Chr6	2857972	G-T	Homo
SBS	Chr6	16595957	T-A	Homo
SBS	Chr6	20565593	G-A	Homo
SBS	Chr6	31199284	G-A	Homo
SBS	Chr7	162511	T-C	HET
SBS	Chr7	294696	T-A	HET
SBS	Chr7	12236459	G-T	HET
SBS	Chr7	20803655	G-A	HET
SBS	Chr7	26730783	G-C	HET
SBS	Chr7	15766708	G-T	Homo
SBS	Chr8	2712899	T-C	HET
SBS	Chr8	14521588	C-T	HET
SBS	Chr8	15892501	G-C	HET
SBS	Chr8	18209044	G-A	HET
SBS	Chr8	18980493	C-T	HET	LOC_Os08g30760
SBS	Chr9	4053933	T-C	HET

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	6127494	6127496	2
Deletion	Chr9	10050060	10050127	67
Deletion	Chr10	10263756	10264157	401
Deletion	Chr4	10881748	10881761	13	LOC_Os04g19540
Deletion	Chr11	11799250	11799260	10
Deletion	Chr5	12380978	12380992	14
Deletion	Chr10	15034263	15034273	10
Deletion	Chr10	15052642	15052644	2	LOC_Os10g28890
Deletion	Chr11	15077201	15114901	37700	5
Deletion	Chr11	15432374	15432375	1
Deletion	Chr5	18708363	18708365	2
Deletion	Chr10	22336921	22336931	10
Deletion	Chr8	22802582	22802584	2
Deletion	Chr11	23474901	23474902	1
Deletion	Chr3	24193790	24196324	2534	LOC_Os03g43390
Deletion	Chr7	26614832	26614839	7
Deletion	Chr1	27640179	27640201	22
Deletion	Chr2	35353967	35353969	2
Deletion	Chr1	37038548	37038549	1
Deletion	Chr1	38314272	38314275	3

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	21273428	21273428	1
Insertion	Chr1	28478784	28478784	1
Insertion	Chr11	937636	937639	4
Insertion	Chr2	25802152	25802152	1
Insertion	Chr3	29662970	29662971	2
Insertion	Chr3	17255353	17255353	1
Insertion	Chr6	21364997	21364997	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	25176862	25385231	2

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	2558231	Chr10	9130497	LOC_Os09g04800
Translocation	Chr11	4335258	Chr7	5854496	LOC_Os07g10770
Translocation	Chr10	8040569	Chr1	42258292	LOC_Os10g15230
Translocation	Chr10	9129702	Chr3	24196323	LOC_Os03g43390
Translocation	Chr5	25286479	Chr3	24193793	2

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