Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN2169-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN2169-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Phenotype |
|
| Variant Information |
|---|
Single base substitutions: 24
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 33396065 | A-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 42600461 | G-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 24905766 | G-A | Homo | INTERGENIC | |
| SBS | Chr2 | 32775227 | G-A | Hetero | INTRON | |
| SBS | Chr2 | 33598204 | A-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 6733056 | T-C | Hetero | INTRON | |
| SBS | Chr4 | 4602315 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 31872535 | C-G | Hetero | INTRON | |
| SBS | Chr5 | 20760078 | G-A | Homo | INTERGENIC | |
| SBS | Chr6 | 11128443 | A-T | Homo | INTERGENIC | |
| SBS | Chr6 | 16965949 | T-A | Homo | INTRON | |
| SBS | Chr7 | 10883791 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 18887940 | A-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 1939864 | G-A | Hetero | INTERGENIC | |
| SBS | Chr8 | 7649787 | C-G | Hetero | INTERGENIC | |
| SBS | Chr8 | 12960744 | T-A | Hetero | INTERGENIC | |
| SBS | Chr8 | 14500173 | C-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 16500388 | C-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 12777071 | G-A | Homo | INTERGENIC | |
| SBS | Chr10 | 19897348 | C-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 2861580 | A-G | Homo | INTERGENIC | |
| SBS | Chr11 | 8557791 | T-G | Homo | INTERGENIC | |
| SBS | Chr11 | 17304457 | A-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 9370095 | C-T | Hetero | INTERGENIC |
Deletions: 18
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr1 | 842001 | 864000 | 21999 | |
| Deletion | Chr6 | 871641 | 871646 | 5 | OsKitaake06g008900 |
| Deletion | Chr12 | 1175001 | 1189000 | 13999 | |
| Deletion | Chr7 | 5894105 | 5894116 | 11 | |
| Deletion | Chr5 | 10928001 | 10937000 | 8999 | |
| Deletion | Chr9 | 12575020 | 12575033 | 13 | |
| Deletion | Chr1 | 13781590 | 13781591 | 1 | |
| Deletion | Chr9 | 14053567 | 14053605 | 38 | |
| Deletion | Chr9 | 16322689 | 16322695 | 6 | |
| Deletion | Chr10 | 19692001 | 19706000 | 13999 | OsKitaake10g145800 |
| Deletion | Chr5 | 21959001 | 21977000 | 17999 | |
| Deletion | Chr2 | 26794001 | 26920000 | 125999 | 10 |
| Deletion | Chr5 | 26981001 | 26994000 | 12999 | |
| Deletion | Chr4 | 28865001 | 28881000 | 15999 | OsKitaake04g217000 |
| Deletion | Chr2 | 29559858 | 29559859 | 1 | OsKitaake02g298000 |
| Deletion | Chr6 | 30096269 | 30096271 | 2 | OsKitaake06g281800 |
| Deletion | Chr4 | 33705001 | 33721000 | 15999 | OsKitaake04g280100 |
| Deletion | Chr2 | 33980001 | 33998000 | 17999 |
Insertions: 1
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr12 | 16545651 | 16545655 | 3 |
Translocations: 1
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr11 | 18113440 | Chr9 | 502308 |