Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN689-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN689-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Phenotype |
|
| Variant Information |
|---|
Single base substitutions: 34
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 6478944 | A-G | Homo | INTERGENIC | |
| SBS | Chr1 | 20409154 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 36208920 | G-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 10779075 | G-A | Homo | UTR_3_PRIME | |
| SBS | Chr2 | 10779077 | C-A | Homo | UTR_3_PRIME | |
| SBS | Chr2 | 13324027 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 3442408 | C-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 4853270 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 12916957 | T-A | Homo | INTERGENIC | |
| SBS | Chr4 | 20277371 | A-C | Homo | INTERGENIC | |
| SBS | Chr4 | 27451492 | A-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 28810236 | T-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 7844549 | G-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 5124109 | G-A | Homo | INTERGENIC | |
| SBS | Chr6 | 11837761 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 29256945 | T-C | Hetero | INTERGENIC | |
| SBS | Chr7 | 26554264 | G-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 14455725 | C-T | Homo | INTERGENIC | |
| SBS | Chr9 | 10911033 | T-C | Homo | INTERGENIC | |
| SBS | Chr9 | 10911035 | G-C | Homo | INTERGENIC | |
| SBS | Chr9 | 10911037 | T-C | Homo | INTERGENIC | |
| SBS | Chr9 | 13246478 | A-T | Homo | INTERGENIC | |
| SBS | Chr9 | 17708887 | A-T | Homo | INTERGENIC | |
| SBS | Chr10 | 1697204 | G-A | Homo | INTERGENIC | |
| SBS | Chr10 | 3001998 | C-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 3095380 | C-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 22614950 | A-C | Homo | INTERGENIC | |
| SBS | Chr11 | 2926552 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 2926553 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 21196763 | A-C | Homo | INTERGENIC | |
| SBS | Chr11 | 21400768 | T-C | Homo | INTERGENIC | |
| SBS | Chr11 | 21400769 | G-A | Homo | INTERGENIC | |
| SBS | Chr11 | 24388482 | G-A | Hetero | UTR_5_PRIME | |
| SBS | Chr12 | 13226085 | G-A | Homo | INTERGENIC |
Deletions: 16
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr7 | 1765119 | 1765120 | 1 | |
| Deletion | Chr6 | 9983395 | 9983404 | 9 | |
| Deletion | Chr3 | 10781767 | 10781778 | 11 | |
| Deletion | Chr9 | 14171942 | 14171943 | 1 | |
| Deletion | Chr9 | 15564369 | 15564373 | 4 | |
| Deletion | Chr10 | 16347001 | 16407000 | 59999 | 9 |
| Deletion | Chr1 | 17283622 | 17284286 | 664 | |
| Deletion | Chr8 | 18301633 | 18301645 | 12 | OsKitaake08g136350 |
| Deletion | Chr1 | 20407458 | 20407459 | 1 | |
| Deletion | Chr6 | 21271616 | 21271617 | 1 | OsKitaake06g188500 |
| Deletion | Chr11 | 22571419 | 22571425 | 6 | |
| Deletion | Chr10 | 22708914 | 22708932 | 18 | |
| Deletion | Chr7 | 23640624 | 23640625 | 1 | |
| Deletion | Chr2 | 26206075 | 26206077 | 2 | |
| Deletion | Chr4 | 26477610 | 26477612 | 2 | |
| Deletion | Chr11 | 27640885 | 27640995 | 110 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr2 | 12723970 | 12723972 | 1 | |
| Insertion | Chr2 | 21568005 | 21568009 | 3 | |
| Insertion | Chr2 | 31799526 | 31799529 | 2 | |
| Insertion | Chr4 | 4414990 | 4414992 | 1 |