Search Results

Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr2	2111402	A-T	HET	INTRON
SBS	Chr2	20621142	G-A	HET	INTERGENIC
SBS	Chr2	24696815	C-T	HET	INTERGENIC
SBS	Chr2	24696816	A-T	HET	INTERGENIC
SBS	Chr2	25493739	G-A	HET	INTRON
SBS	Chr2	28131721	A-T	HET	INTERGENIC
SBS	Chr2	28265966	C-G	HET	INTERGENIC
SBS	Chr2	28265973	T-G	HET	INTERGENIC
SBS	Chr2	29384984	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g48010
SBS	Chr2	35320870	C-A	HET	UTR_3_PRIME
SBS	Chr2	35320871	C-A	HET	UTR_3_PRIME
SBS	Chr3	17284824	C-A	HOMO	INTERGENIC
SBS	Chr3	24130349	T-C	HOMO	INTRON
SBS	Chr3	31421523	C-A	HET	INTERGENIC
SBS	Chr4	8790574	C-A	HET	SYNONYMOUS_CODING
SBS	Chr4	11786631	G-T	HOMO	INTRON
SBS	Chr4	11897427	C-T	HOMO	INTRON
SBS	Chr4	11979210	G-A	HET	INTERGENIC
SBS	Chr4	16917956	T-C	HOMO	INTERGENIC
SBS	Chr6	3670457	G-C	HOMO	INTERGENIC
SBS	Chr7	12649102	G-T	HET	INTERGENIC
SBS	Chr7	19537966	G-A	HET	INTERGENIC
SBS	Chr8	430654	T-C	HET	INTERGENIC
SBS	Chr8	12695180	C-T	HOMO	INTERGENIC
SBS	Chr9	5624693	C-A	HET	INTERGENIC
SBS	Chr10	2032071	G-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os10g04290
SBS	Chr10	20539392	G-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os10g38450
SBS	Chr10	20539393	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os10g38450

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	3124451	3124463	12	LOC_Os09g06560
Deletion	Chr10	5170451	5170452	1
Deletion	Chr5	9237001	9247000	10000	2
Deletion	Chr5	9259001	9316000	57000	8
Deletion	Chr3	10407047	10407048	1
Deletion	Chr7	12738840	12738843	3
Deletion	Chr12	13013257	13013274	17
Deletion	Chr1	13611652	13611659	7
Deletion	Chr1	15515865	15515869	4
Deletion	Chr11	21634693	21634697	4	LOC_Os11g36660
Deletion	Chr8	22701538	22701571	33
Deletion	Chr1	22728310	22728312	2	LOC_Os01g40250
Deletion	Chr3	26742332	26742333	1
Deletion	Chr7	27694509	27694655	146	LOC_Os07g46410
Deletion	Chr1	29686001	30414000	728000	116
Deletion	Chr2	29790112	29790113	1

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr7	29563869	29563872	4

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	24249149	24490250

No Translocation

Main menu