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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1509530	C-T	HET	INTRON
SBS	Chr1	18022671	C-G	HET	INTRON
SBS	Chr1	28462357	C-T	HET	INTERGENIC
SBS	Chr1	3781995	C-A	HET	UTR_3_PRIME
SBS	Chr10	12001228	T-A	HET	INTERGENIC
SBS	Chr10	17932932	T-A	HOMO	INTERGENIC
SBS	Chr10	21511777	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr10	21511778	A-T	HOMO	STOP_GAINED	LOC_Os10g40180
SBS	Chr10	6859713	C-T	HET	INTERGENIC
SBS	Chr11	11360475	C-T	HOMO	INTERGENIC
SBS	Chr11	14696960	A-G	HOMO	INTERGENIC
SBS	Chr11	21587799	A-T	HET	INTERGENIC
SBS	Chr12	15584391	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g26610
SBS	Chr2	14976411	A-T	HOMO	INTERGENIC
SBS	Chr2	15364854	G-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os02g26160
SBS	Chr2	9606960	G-A	HET	INTRON
SBS	Chr3	10262719	A-C	HET	INTRON
SBS	Chr3	15130503	C-A	HET	INTERGENIC
SBS	Chr3	15130504	C-T	HET	INTERGENIC
SBS	Chr4	13343978	T-A	HET	INTERGENIC
SBS	Chr4	30686975	C-T	HET	SYNONYMOUS_CODING
SBS	Chr5	28946281	C-T	HOMO	INTRON
SBS	Chr6	24712163	C-T	HET	INTERGENIC
SBS	Chr6	26379269	T-A	HET	INTERGENIC
SBS	Chr7	28504945	G-C	HET	SYNONYMOUS_CODING
SBS	Chr8	12007088	T-C	HET	INTERGENIC
SBS	Chr9	16210852	T-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os09g26680

Deletions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	12624879	12624885	6
Deletion	Chr11	16522405	16522406	1
Deletion	Chr8	16957189	16957190	1
Deletion	Chr11	21717837	21717844	7
Deletion	Chr8	24668938	24668945	7
Deletion	Chr11	25636001	26162000	526000	75
Deletion	Chr5	28939400	28939433	33
Deletion	Chr4	29492001	29538000	46000	9
Deletion	Chr1	29547558	29547566	8

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	4888630	4888633	4
Insertion	Chr5	24181610	24181615	6

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	1411551	1919231
Inversion	Chr9	10240858	10395821

No Translocation

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