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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr2	2069262	G-T	HOMO	INTERGENIC
SBS	Chr2	6506183	C-G	HET	INTERGENIC
SBS	Chr2	15064120	T-A	HET	INTRON
SBS	Chr2	29292674	A-T	HET	INTERGENIC
SBS	Chr2	34757723	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr3	25691770	G-A	HET	SYNONYMOUS_CODING
SBS	Chr4	1463004	G-A	HET	INTRON
SBS	Chr4	20539640	C-T	HOMO	INTERGENIC
SBS	Chr6	1924125	G-A	HOMO	INTERGENIC
SBS	Chr6	16334201	G-C	HET	INTERGENIC
SBS	Chr6	31191438	G-A	HET	INTERGENIC
SBS	Chr7	11143768	G-A	HOMO	INTERGENIC
SBS	Chr7	11172830	C-A	HOMO	INTRON
SBS	Chr7	29109043	T-A	HET	INTERGENIC
SBS	Chr7	29109044	G-A	HET	INTERGENIC
SBS	Chr8	1834180	T-C	HET	SPLICE_SITE_REGION
SBS	Chr8	6880585	G-A	HET	INTERGENIC
SBS	Chr8	7231716	C-G	HET	INTERGENIC
SBS	Chr8	13484119	G-A	HET	INTERGENIC
SBS	Chr8	18789840	A-T	HET	INTERGENIC
SBS	Chr8	18803017	C-T	HOMO	INTRON
SBS	Chr10	8605251	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr11	10919192	C-A	HET	INTRON
SBS	Chr11	18865564	C-T	HET	INTERGENIC
SBS	Chr11	24230085	G-C	HET	INTERGENIC
SBS	Chr11	26777790	G-A	HET	INTERGENIC
SBS	Chr12	13443567	C-T	HET	INTERGENIC

Deletions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	3677975	3677976	1
Deletion	Chr10	6738803	6738983	180	LOC_Os10g12130
Deletion	Chr3	6762215	6762217	2
Deletion	Chr7	6962382	6962383	1
Deletion	Chr10	8283012	8283019	7
Deletion	Chr9	8715129	8715148	19
Deletion	Chr9	12979550	12979551	1
Deletion	Chr6	13781782	13781783	1
Deletion	Chr2	14156754	14156762	8
Deletion	Chr2	14329863	14329879	16
Deletion	Chr4	15847379	15847381	2
Deletion	Chr2	17286857	17286861	4
Deletion	Chr2	19942980	19942988	8
Deletion	Chr5	20065180	20065283	103	LOC_Os05g33980
Deletion	Chr2	20180432	20180435	3	LOC_Os02g33850
Deletion	Chr4	20567302	20567314	12
Deletion	Chr3	21922227	21922244	17
Deletion	Chr12	21956543	21956544	1	LOC_Os12g35930
Deletion	Chr10	21999179	21999181	2
Deletion	Chr7	22737362	22737369	7
Deletion	Chr1	23636973	23636991	18
Deletion	Chr5	23680969	23680993	24
Deletion	Chr7	24599595	24599596	1
Deletion	Chr8	25051843	25051844	1
Deletion	Chr6	25383001	25493000	110000	16
Deletion	Chr7	25700384	25700407	23
Deletion	Chr12	25757408	25757409	1
Deletion	Chr7	28951688	28951745	57

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	16101749	16101750	2
Insertion	Chr4	34730832	34730835	4

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	34197836	34513794

No Translocation

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