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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14196489	G-A	HET	INTERGENIC
SBS	Chr1	15803200	A-C	HET	INTERGENIC
SBS	Chr1	33039261	A-G	HET	INTRON
SBS	Chr2	19074958	T-C	HOMO	INTRON
SBS	Chr2	25970141	G-A	HOMO	INTERGENIC
SBS	Chr2	25970143	G-A	HOMO	INTERGENIC
SBS	Chr2	25981673	T-A	HOMO	INTERGENIC
SBS	Chr3	17669180	C-A	HET	INTERGENIC
SBS	Chr3	27225713	T-A	HET	INTERGENIC
SBS	Chr3	34554526	A-G	HOMO	INTERGENIC
SBS	Chr4	4607071	A-T	HET	INTERGENIC
SBS	Chr4	12837871	G-T	HET	INTERGENIC
SBS	Chr4	22949017	C-A	HOMO	INTRON
SBS	Chr5	7975444	C-T	HET	INTRON
SBS	Chr6	410664	T-A	HET	INTERGENIC
SBS	Chr6	13627872	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g23340
SBS	Chr7	26760017	G-A	HET	INTERGENIC
SBS	Chr9	22307975	C-A	HET	SYNONYMOUS_CODING
SBS	Chr10	7387703	G-A	HOMO	INTRON
SBS	Chr10	12654191	G-A	HOMO	INTERGENIC
SBS	Chr11	14288053	T-A	HOMO	INTRON
SBS	Chr11	15824640	T-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g27510
SBS	Chr12	7394959	T-G	HET	INTERGENIC
SBS	Chr12	8540836	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g14930
SBS	Chr12	19830141	T-A	HET	SYNONYMOUS_CODING
SBS	Chr12	20544912	G-A	HET	INTERGENIC

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	8150356	8150365	9
Deletion	Chr2	9450165	9450173	8	LOC_Os02g16544
Deletion	Chr9	11134173	11134176	3
Deletion	Chr6	11574001	11999000	425000	57
Deletion	Chr9	13856623	13856639	16
Deletion	Chr5	14442035	14442051	16	LOC_Os05g24960
Deletion	Chr5	14444761	14444781	20
Deletion	Chr5	15443697	15443708	11	LOC_Os05g26580
Deletion	Chr5	17850636	17850648	12
Deletion	Chr3	18581726	18581738	12
Deletion	Chr2	18931283	18931288	5
Deletion	Chr8	20452783	20453866	1083
Deletion	Chr1	20477679	20477680	1
Deletion	Chr2	21511340	21511341	1
Deletion	Chr4	26252061	26252062	1	LOC_Os04g44320
Deletion	Chr6	26444002	26444009	7
Deletion	Chr12	27364465	27364487	22

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	29199100	29199101	2
Insertion	Chr10	21996470	21996473	4
Insertion	Chr2	25586548	25586549	2
Insertion	Chr8	26530008	26530008	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	17816004	18415305	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	14484975	Chr4	17873667
Translocation	Chr6	18029927	Chr3	14532758	LOC_Os06g30990

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