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Mutant Information

SOS indicates the sequenced line is sterile and seeds from siblings are available.

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14237519	C-T	HET
SBS	Chr1	15434127	G-C	HET
SBS	Chr1	20556707	C-T	Homo
SBS	Chr1	42287068	G-T	HET
SBS	Chr1	43015895	T-C	Homo
SBS	Chr1	5265450	G-C	Homo
SBS	Chr11	15458560	T-C	HET
SBS	Chr11	20376966	A-T	HET
SBS	Chr12	17088487	A-G	HET
SBS	Chr12	17947633	C-T	Homo
SBS	Chr12	22319313	C-T	Homo
SBS	Chr12	26062782	G-A	HET
SBS	Chr12	4333211	T-G	HET
SBS	Chr2	13366986	G-A	Homo
SBS	Chr2	23119809	G-A	Homo
SBS	Chr2	25457551	C-G	Homo
SBS	Chr2	29734565	T-C	HET
SBS	Chr2	6351177	A-T	Homo
SBS	Chr4	22282695	T-C	HET
SBS	Chr4	34218823	T-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g57520
SBS	Chr5	4648494	C-G	HET
SBS	Chr6	11046324	C-T	Homo
SBS	Chr6	15503733	T-C	HET
SBS	Chr6	30093543	G-C	HET
SBS	Chr7	10040650	C-T	Homo
SBS	Chr7	10040675	G-C	HET
SBS	Chr7	4446007	G-A	HET
SBS	Chr7	8598078	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os07g14990
SBS	Chr8	1176555	G-A	HET
SBS	Chr8	27756349	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g44070
SBS	Chr8	6280808	G-C	HET

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1223063	1223064	1
Deletion	Chr5	2356050	2356057	7
Deletion	Chr2	2835605	2835607	2
Deletion	Chr7	4226565	4226568	3
Deletion	Chr7	8477292	8477293	1
Deletion	Chr7	10466001	10683000	216999	34
Deletion	Chr1	10472001	10495000	22999	4
Deletion	Chr7	11399654	11399830	176	LOC_Os07g19250
Deletion	Chr10	11736928	11736934	6
Deletion	Chr12	18263751	18263753	2
Deletion	Chr7	18898205	18898208	3	LOC_Os07g31800
Deletion	Chr6	22263641	22263651	10
Deletion	Chr4	22514001	22567000	52999	9
Deletion	Chr2	22667220	22667230	10	LOC_Os02g37580
Deletion	Chr4	23556253	23556258	5	LOC_Os04g39560
Deletion	Chr2	23611696	23611709	13
Deletion	Chr12	23863256	23863258	2
Deletion	Chr7	24930686	24930687	1
Deletion	Chr11	25754419	25754424	5
Deletion	Chr7	28457001	28472000	14999	3
Deletion	Chr1	31771212	31771215	3
Deletion	Chr3	34390786	34390787	1
Deletion	Chr3	36145260	36145261	1

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	14347778	14347782	5
Insertion	Chr2	28634162	28634165	4

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	10512022	10512214
Inversion	Chr11	18924012	19106887	LOC_Os11g32100
Inversion	Chr11	23683209	23836567
Inversion	Chr11	23836572	23844256

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	10511348	Chr6	11334670
Translocation	Chr10	16394933	Chr4	27332032
Translocation	Chr12	22567715	Chr9	13370471
Translocation	Chr12	22567791	Chr9	13369565
Translocation	Chr8	27378749	Chr2	14991322	LOC_Os08g43320

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