Search Results

Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	16202539	C-T	HET
SBS	Chr1	17544635	T-A	HET
SBS	Chr1	21315602	C-A	HET
SBS	Chr1	21315604	G-A	HET
SBS	Chr1	21315608	T-A	HET
SBS	Chr1	23572388	A-T	HET
SBS	Chr1	26341942	A-T	HET
SBS	Chr3	3971773	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g07800
SBS	Chr3	22457513	A-G	HET
SBS	Chr4	3116779	C-T	Homo	STOP_GAINED	LOC_Os04g06010
SBS	Chr4	17556348	A-T	HET
SBS	Chr4	19190720	A-T	HET
SBS	Chr4	27464345	T-A	Homo
SBS	Chr5	14000117	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g24200
SBS	Chr5	27358364	C-A	HET
SBS	Chr5	27358365	T-A	HET
SBS	Chr6	2038291	A-T	Homo
SBS	Chr6	29712177	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os06g49020
SBS	Chr6	29785457	C-A	HET
SBS	Chr7	187808	T-C	Homo
SBS	Chr7	25769956	C-T	HET
SBS	Chr8	15553746	C-T	HET
SBS	Chr8	18683015	C-T	HET
SBS	Chr8	23667308	A-T	Homo
SBS	Chr9	6229245	C-T	HET
SBS	Chr9	10825658	G-A	HET
SBS	Chr9	19844625	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g33610
SBS	Chr9	22280260	G-A	HET
SBS	Chr9	22280261	G-T	HET
SBS	Chr9	22753455	T-C	HET
SBS	Chr11	2154141	G-A	Homo
SBS	Chr11	3940393	G-A	Homo
SBS	Chr11	8165507	A-G	Homo
SBS	Chr11	17122568	T-C	HET
SBS	Chr11	23450752	C-T	HET
SBS	Chr12	11468824	T-G	Homo
SBS	Chr12	14077593	G-A	HET
SBS	Chr12	14279150	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g24890
SBS	Chr12	19813272	C-G	HET

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	2154042	2154043	1
Deletion	Chr11	2538326	2538327	1
Deletion	Chr11	5688299	5688301	2	LOC_Os11g10440
Deletion	Chr10	8115250	8115251	1
Deletion	Chr11	9377136	9377145	9
Deletion	Chr10	9932001	10189000	256999	42
Deletion	Chr10	10203001	10250000	46999	11
Deletion	Chr8	11174884	11174885	1	LOC_Os08g18730
Deletion	Chr6	14978144	14978154	10
Deletion	Chr3	15266969	15266971	2
Deletion	Chr3	15735563	15735576	13
Deletion	Chr3	17994513	17994516	3
Deletion	Chr4	19075167	19075199	32	LOC_Os04g31860
Deletion	Chr8	20426985	20426987	2

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr3	31613141	31613141	1
Insertion	Chr12	22863412	22863417	6
Insertion	Chr7	171740	171740	1
Insertion	Chr10	3923863	3923863	1
Insertion	Chr10	9180137	9180142	6

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	12981961	13230015
Inversion	Chr5	13474285	13999790	2
Inversion	Chr5	13474301	13930292	2
Inversion	Chr12	14437332	14441250

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	955080	Chr1	1925140
Translocation	Chr2	7158889	Chr1	35235637
Translocation	Chr10	10054568	Chr2	23301022
Translocation	Chr10	10202226	Chr8	17046573
Translocation	Chr8	10523786	Chr6	27322816
Translocation	Chr7	12597367	Chr4	12087422	2
Translocation	Chr11	13307210	Chr8	6445842
Translocation	Chr12	16182375	Chr4	32905479	2
Translocation	Chr8	18628537	Chr4	2531310	2
Translocation	Chr6	27219929	Chr5	1081605	LOC_Os06g45000

Main menu