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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10336117	A-T	Homo
SBS	Chr1	10559810	G-C	HET
SBS	Chr1	19841852	A-C	Homo
SBS	Chr1	35169198	T-C	HET
SBS	Chr1	3732433	C-G	HET
SBS	Chr1	3992814	T-G	HET
SBS	Chr1	3993093	C-A	HET
SBS	Chr10	23010525	C-T	Homo
SBS	Chr11	10254338	T-G	HET
SBS	Chr11	9437658	T-G	Homo
SBS	Chr12	14825428	C-T	HET
SBS	Chr12	9554469	T-C	HET
SBS	Chr12	9726778	G-A	HET
SBS	Chr2	25480062	G-A	Homo
SBS	Chr3	17835288	T-G	HET
SBS	Chr4	11333499	C-A	HET
SBS	Chr4	4642319	A-G	Homo
SBS	Chr5	19614520	C-G	HET
SBS	Chr6	1120901	G-A	HET
SBS	Chr6	5460172	G-T	HET
SBS	Chr8	25588496	C-T	HET
SBS	Chr8	8285311	C-T	HET
SBS	Chr8	9186171	C-T	Homo
SBS	Chr8	9778609	C-A	Homo
SBS	Chr9	10121837	C-T	HET
SBS	Chr9	17863237	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g29404
SBS	Chr9	5448656	T-A	HET

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	1507700	1507718	18
Deletion	Chr12	4350777	4350800	23
Deletion	Chr9	5260299	5260300	1	LOC_Os09g09720
Deletion	Chr6	11647912	11647913	1
Deletion	Chr4	11663448	11663451	3	LOC_Os04g20790
Deletion	Chr5	12131073	12131074	1
Deletion	Chr10	13455408	13455409	1	LOC_Os10g25960
Deletion	Chr3	14641870	14641872	2	LOC_Os03g25590
Deletion	Chr6	14715432	14715433	1
Deletion	Chr5	17268424	17268425	1	LOC_Os05g29840
Deletion	Chr12	26886516	26886530	14

Insertions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	14431284	14431286	3
Insertion	Chr3	19069149	19069150	2
Insertion	Chr4	14592733	14592737	5
Insertion	Chr4	29016773	29016773	1
Insertion	Chr5	9120922	9120922	1	LOC_Os05g16130
Insertion	Chr6	29311611	29311611	1
Insertion	Chr7	14141756	14141757	2
Insertion	Chr7	18889188	18889188	1
Insertion	Chr7	21110377	21110377	1
Insertion	Chr8	16126126	16126126	1
Insertion	Chr8	16257741	16257750	10
Insertion	Chr8	2824391	2824391	1	LOC_Os08g05360
Insertion	Chr8	5022341	5022343	3

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	88245	190571	2
Inversion	Chr3	88256	190821	2
Inversion	Chr5	26609545	27033185	2
Inversion	Chr2	29060868	29233108	2
Inversion	Chr2	29060881	29233116	2

Translocations: 28

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr3	190578	Chr2	14232080	2
Translocation	Chr3	190802	Chr2	14232082	2
Translocation	Chr8	806229	Chr3	16461419
Translocation	Chr5	1851214	Chr4	1112171	2
Translocation	Chr9	5821147	Chr6	691536
Translocation	Chr8	6526988	Chr4	1144267
Translocation	Chr5	8554284	Chr2	14893235
Translocation	Chr6	9792073	Chr5	5048142	2
Translocation	Chr8	10129284	Chr7	5928609
Translocation	Chr9	10182907	Chr7	29478872	2
Translocation	Chr10	10202228	Chr8	17046589
Translocation	Chr6	10428824	Chr4	742427
Translocation	Chr11	10874570	Chr2	5944612	2
Translocation	Chr12	14047873	Chr4	30046413
Translocation	Chr11	15781728	Chr8	18461450
Translocation	Chr7	16486252	Chr5	5101464
Translocation	Chr6	18029567	Chr1	15311960	2
Translocation	Chr11	18371992	Chr10	879842	LOC_Os11g31440
Translocation	Chr12	18642393	Chr10	17911445
Translocation	Chr10	18963098	Chr1	27209441
Translocation	Chr10	19374389	Chr8	18274054	LOC_Os10g36250
Translocation	Chr11	20125958	Chr3	8265507	2
Translocation	Chr2	25284977	Chr1	12528665
Translocation	Chr11	26331049	Chr10	20813218	2
Translocation	Chr11	27437925	Chr4	18762741	LOC_Os11g45360
Translocation	Chr11	28255922	Chr2	13043334	LOC_Os11g47030
Translocation	Chr11	28408444	Chr9	408710	2
Translocation	Chr11	28671319	Chr8	6707695	2

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