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Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12688714	A-G	HET
SBS	Chr1	18681679	C-T	HET
SBS	Chr1	23044949	A-T	HET
SBS	Chr1	6418307	G-A	Homo
SBS	Chr10	18497224	A-G	HET
SBS	Chr10	19828778	G-A	HET
SBS	Chr10	19964307	T-C	HET
SBS	Chr11	24880397	C-A	HET
SBS	Chr11	24881036	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g41480
SBS	Chr12	1239570	A-G	HET
SBS	Chr2	12051526	G-A	Homo
SBS	Chr2	15122800	G-A	Homo
SBS	Chr2	20244958	G-T	HET
SBS	Chr2	22577222	T-C	HET
SBS	Chr2	22816256	G-A	HET
SBS	Chr2	29507836	C-T	HET
SBS	Chr2	34406961	C-T	HET
SBS	Chr3	15472926	C-A	HET
SBS	Chr3	18617726	T-C	HET
SBS	Chr3	20393500	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g36760
SBS	Chr3	31572133	A-C	Homo
SBS	Chr3	532718	A-T	HET
SBS	Chr3	9233155	G-A	Homo
SBS	Chr4	22258064	A-T	Homo
SBS	Chr4	22850157	A-T	Homo
SBS	Chr4	27043576	C-A	HET
SBS	Chr4	27270079	A-T	Homo
SBS	Chr5	13260095	T-A	HET
SBS	Chr5	22688069	C-T	HET
SBS	Chr5	27925977	C-T	Homo
SBS	Chr5	27961482	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g48790
SBS	Chr6	11730669	A-T	HET
SBS	Chr7	26258241	G-A	Homo
SBS	Chr8	3225183	T-C	HET
SBS	Chr8	8208359	G-A	HET
SBS	Chr9	16248012	G-T	HET
SBS	Chr9	2025241	G-T	Homo
SBS	Chr9	22833921	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g39820
SBS	Chr9	752329	T-C	Homo

Deletions: 29

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	3568657	3568659	2
Deletion	Chr2	3815001	3847000	31999	8
Deletion	Chr9	4203786	4203790	4
Deletion	Chr10	4274820	4274830	10
Deletion	Chr10	4715001	4744000	28999	7
Deletion	Chr3	5378927	5378938	11	LOC_Os03g10540
Deletion	Chr3	6024384	6024385	1
Deletion	Chr5	6647092	6647100	8
Deletion	Chr2	9644233	9644239	6
Deletion	Chr1	13912172	13912177	5	LOC_Os01g24720
Deletion	Chr3	13952786	13952787	1
Deletion	Chr8	14937119	14937120	1
Deletion	Chr6	15949502	15949505	3
Deletion	Chr3	16228839	16228842	3
Deletion	Chr7	17674656	17674661	5
Deletion	Chr1	18030882	18030883	1
Deletion	Chr6	19641001	19715000	73999	14
Deletion	Chr2	20141433	20141434	1
Deletion	Chr1	20856251	20856261	10	LOC_Os01g37350
Deletion	Chr5	22624518	22624520	2
Deletion	Chr4	24050903	24050904	1	LOC_Os04g40470
Deletion	Chr8	25798900	25798901	1
Deletion	Chr4	26628989	26628995	6
Deletion	Chr6	26976870	26976871	1
Deletion	Chr2	27323546	27323551	5
Deletion	Chr1	27545022	27545024	2
Deletion	Chr1	31172976	31172980	4
Deletion	Chr1	31827362	31827364	2
Deletion	Chr1	40059498	40059500	2

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	8282989	8282990	2
Insertion	Chr11	7897062	7897062	1
Insertion	Chr3	32790080	32790080	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	33419961	33486725	2
Inversion	Chr1	33419966	33486726	2

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	4742412	Chr8	7313341	2
Translocation	Chr10	4742503	Chr5	29003293
Translocation	Chr10	4744045	Chr8	7313332	2
Translocation	Chr11	5733925	Chr1	10234167

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