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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10076936	G-A	HOMO	INTERGENIC
SBS	Chr1	36788746	C-A	HET	INTERGENIC
SBS	Chr10	2904602	G-A	HET	INTERGENIC
SBS	Chr11	17802184	G-A	HET	INTERGENIC
SBS	Chr11	22921246	G-A	HOMO	INTERGENIC
SBS	Chr11	7481473	T-A	HOMO	INTERGENIC
SBS	Chr2	19778409	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g33280
SBS	Chr2	9662114	T-C	HOMO	INTERGENIC
SBS	Chr3	22083663	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os03g39690
SBS	Chr3	23506266	C-T	HET	INTERGENIC
SBS	Chr3	24247323	A-T	HET	INTRON
SBS	Chr3	24247327	T-G	HET	INTRON
SBS	Chr3	34053907	G-A	HET	INTERGENIC
SBS	Chr3	34053908	T-A	HET	INTERGENIC
SBS	Chr4	12422827	A-G	HET	INTERGENIC
SBS	Chr4	27435882	G-A	HOMO	INTERGENIC
SBS	Chr5	11478897	C-T	HET	INTERGENIC
SBS	Chr5	3657891	A-T	HOMO	INTRON
SBS	Chr6	17516062	A-G	HET	INTERGENIC
SBS	Chr6	23468519	C-G	HOMO	SYNONYMOUS_CODING
SBS	Chr7	19090824	A-T	HOMO	INTERGENIC
SBS	Chr7	26451254	T-A	HOMO	INTERGENIC
SBS	Chr7	6536050	T-A	HET	INTERGENIC
SBS	Chr8	21099257	T-C	HOMO	INTERGENIC
SBS	Chr8	28029920	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g44570
SBS	Chr8	6539729	C-T	HET	INTRON

Deletions: 31

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	2488992	2488998	6
Deletion	Chr4	5410428	5410527	99
Deletion	Chr9	6308330	6308331	1	LOC_Os09g11360
Deletion	Chr2	6314752	6314753	1
Deletion	Chr10	6538743	6538744	1
Deletion	Chr8	7022730	7022731	1
Deletion	Chr8	7527214	7527215	1	LOC_Os08g12700
Deletion	Chr2	9662851	9662854	3
Deletion	Chr8	10342622	10342642	20
Deletion	Chr4	10892333	10892334	1	LOC_Os04g19570
Deletion	Chr4	12358677	12358679	2
Deletion	Chr5	12760901	12760911	10
Deletion	Chr11	12867001	12923000	55999	7
Deletion	Chr5	12964801	12964804	3
Deletion	Chr9	13327557	13327563	6
Deletion	Chr1	14521820	14521825	5
Deletion	Chr1	14526889	14526894	5
Deletion	Chr2	16029001	16065000	35999	4
Deletion	Chr6	18659093	18659113	20
Deletion	Chr4	20421936	20421942	6
Deletion	Chr6	21044696	21044698	2
Deletion	Chr12	22195000	22195001	1
Deletion	Chr7	23031652	23031655	3
Deletion	Chr3	23173015	23173018	3
Deletion	Chr4	25266320	25266321	1
Deletion	Chr7	26451175	26451198	23
Deletion	Chr8	27629018	27629019	1
Deletion	Chr6	29548862	29548863	1
Deletion	Chr3	30424615	30424616	1
Deletion	Chr4	31706754	31706757	3
Deletion	Chr4	32858778	32858784	6	LOC_Os04g55260

Insertions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	16892124	16892124	1
Insertion	Chr1	34060853	34060853	1
Insertion	Chr11	4497756	4497846	91
Insertion	Chr12	514165	514171	7
Insertion	Chr12	8459840	8459841	2
Insertion	Chr3	8279046	8279046	1
Insertion	Chr4	15267460	15267460	1
Insertion	Chr4	21688311	21688319	9
Insertion	Chr4	21859745	21859745	1	LOC_Os04g35870
Insertion	Chr4	3192521	3192521	1
Insertion	Chr5	12293147	12293147	1
Insertion	Chr5	13342957	13342957	1
Insertion	Chr5	17878543	17878617	75
Insertion	Chr5	29927679	29927679	1
Insertion	Chr5	8545829	8545829	1
Insertion	Chr5	8736477	8736477	1
Insertion	Chr7	1308316	1308333	18
Insertion	Chr7	16671841	16671842	2
Insertion	Chr8	16259313	16259313	1
Insertion	Chr8	18790086	18790086	1
Insertion	Chr9	10011417	10011417	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr8	9997009	10345377
Inversion	Chr11	11660550	11660943
Inversion	Chr1	19048274	19049418

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	759192	Chr1	8511534	2
Translocation	Chr10	3866407	Chr7	9520237
Translocation	Chr11	4272682	Chr4	4022147
Translocation	Chr10	11440229	Chr3	13483592
Translocation	Chr4	13589818	Chr1	41115853
Translocation	Chr11	15088170	Chr2	21674525
Translocation	Chr11	15949078	Chr7	18864237
Translocation	Chr8	27378378	Chr6	10369650

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