Search Results

Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	28697776	C-T	HOMO	INTRON
SBS	Chr1	40378062	C-T	HET	INTERGENIC
SBS	Chr2	2825595	A-T	HET	INTRON
SBS	Chr2	17473750	C-T	HET	INTERGENIC
SBS	Chr2	17994851	A-G	HET	INTERGENIC
SBS	Chr2	18699651	G-A	HET	INTERGENIC
SBS	Chr2	34679271	A-T	HET	INTERGENIC
SBS	Chr3	1149157	A-C	HET	INTERGENIC
SBS	Chr3	20111936	C-T	HET	INTERGENIC
SBS	Chr3	28604609	G-A	HOMO	UTR_3_PRIME
SBS	Chr3	30230114	C-T	HOMO	UTR_5_PRIME
SBS	Chr4	29870338	A-C	HET	INTERGENIC
SBS	Chr5	13406769	G-A	HET	INTRON
SBS	Chr5	13406770	T-A	HET	INTRON
SBS	Chr5	14914882	C-G	HET	INTERGENIC
SBS	Chr5	22467378	G-A	HET	INTERGENIC
SBS	Chr6	1153506	C-G	HET	INTERGENIC
SBS	Chr6	19422410	C-T	HET	INTERGENIC
SBS	Chr6	26389614	T-C	HET	INTRON
SBS	Chr7	10920008	T-C	HET	INTERGENIC
SBS	Chr7	19640629	A-G	HOMO	INTERGENIC
SBS	Chr8	7921724	A-G	HET	INTRON
SBS	Chr10	2952152	A-G	HET	INTERGENIC
SBS	Chr10	10130029	G-A	HET	INTRON
SBS	Chr11	2973114	A-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g06220
SBS	Chr11	25090109	T-C	HET	INTERGENIC
SBS	Chr12	4233252	A-T	HOMO	INTERGENIC
SBS	Chr12	8266454	G-T	HET	SYNONYMOUS_CODING
SBS	Chr12	21684263	C-T	HET	INTERGENIC
SBS	Chr12	23591233	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os12g38430

Deletions: 29

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	1278974	1278976	2
Deletion	Chr2	1582927	1582940	13
Deletion	Chr6	1615665	1615672	7
Deletion	Chr8	2334689	2334693	4
Deletion	Chr2	3025742	3025744	2
Deletion	Chr11	3713536	3713544	8
Deletion	Chr5	5130374	5130447	73
Deletion	Chr6	5543356	5543359	3
Deletion	Chr3	6549749	6549750	1
Deletion	Chr6	9295863	9295875	12	LOC_Os06g16310
Deletion	Chr3	9469443	9469444	1
Deletion	Chr1	13920763	13920766	3
Deletion	Chr5	18411001	18841000	429999	64
Deletion	Chr7	19715886	19715887	1
Deletion	Chr12	19879170	19879171	1
Deletion	Chr6	20318125	20318132	7
Deletion	Chr5	20397125	20397217	92	LOC_Os05g34420
Deletion	Chr4	21204623	21204628	5
Deletion	Chr5	21863695	21863696	1
Deletion	Chr5	21863696	21863697	1
Deletion	Chr5	22926467	22926473	6
Deletion	Chr8	23616490	23616495	5
Deletion	Chr8	25082434	25082470	36
Deletion	Chr8	25598603	25598608	5
Deletion	Chr4	26006114	26006118	4
Deletion	Chr7	27027260	27027266	6
Deletion	Chr7	27359126	27359139	13
Deletion	Chr6	27833069	27833070	1
Deletion	Chr2	29130148	29130149	1

Insertions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	3665198	3665199	2
Insertion	Chr4	19677528	19677528	1
Insertion	Chr6	12924608	12924609	2
Insertion	Chr7	4124573	4124574	2
Insertion	Chr12	748521	748522	2
Insertion	Chr4	12153925	12153925	1
Insertion	Chr8	9811693	9811693	1	LOC_Os08g16090
Insertion	Chr8	12575994	12575994	1
Insertion	Chr9	4919476	4919476	1
Insertion	Chr9	17055483	17055483	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr12	4729117	5110444
Inversion	Chr12	4729120	5110460
Inversion	Chr1	28399552	28580801

Translocations: 11

Variant Type	Chromosome	Position 1	Chromosome	Position 2
Translocation	Chr5	314129	Chr1	18404001
Translocation	Chr5	314132	Chr1	18404423
Translocation	Chr8	1863211	Chr7	11426048
Translocation	Chr4	5757812	Chr3	13473740
Translocation	Chr8	13038545	Chr4	29063966
Translocation	Chr9	13194182	Chr2	30102441
Translocation	Chr12	16493847	Chr7	13266627
Translocation	Chr11	18032334	Chr4	8324480
Translocation	Chr11	19735829	Chr9	17966312
Translocation	Chr10	22453834	Chr8	19268753
Translocation	Chr5	22752860	Chr4	405568

Main menu