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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	20197552	C-T	HOMO	INTRON
SBS	Chr10	21995924	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g40960
SBS	Chr11	17833607	G-T	HOMO	INTERGENIC
SBS	Chr11	18790904	A-T	HOMO	INTERGENIC
SBS	Chr12	23651748	G-A	HET	INTERGENIC
SBS	Chr12	2549894	A-G	HOMO	INTERGENIC
SBS	Chr2	26959123	T-A	HET	INTRON
SBS	Chr2	35502036	C-G	HOMO	INTERGENIC
SBS	Chr3	6214359	G-C	HET	INTRON
SBS	Chr3	8032870	A-T	HET	INTERGENIC
SBS	Chr3	8032871	A-T	HET	INTERGENIC
SBS	Chr4	21270945	G-C	HET	INTERGENIC
SBS	Chr4	4719037	C-T	HET	INTERGENIC
SBS	Chr4	6613149	C-A	HET	INTERGENIC
SBS	Chr5	1626526	C-T	HET	INTERGENIC
SBS	Chr6	11215349	A-C	HET	INTERGENIC
SBS	Chr6	2092292	G-A	HET	INTRON
SBS	Chr6	21042864	A-G	HET	INTERGENIC
SBS	Chr6	31226760	G-A	HET	INTERGENIC
SBS	Chr6	6023219	A-G	HET	INTERGENIC
SBS	Chr7	28225689	G-A	HOMO	INTERGENIC
SBS	Chr7	29402186	A-T	HOMO	INTERGENIC
SBS	Chr8	1370229	C-T	HET	INTERGENIC
SBS	Chr8	15871951	C-T	HET	INTRON
SBS	Chr9	11194962	C-T	HET	INTRON

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	5158601	5158610	9
Deletion	Chr4	7125682	7125695	13
Deletion	Chr8	7562561	7562563	2
Deletion	Chr6	8233723	8233724	1
Deletion	Chr1	10175274	10175275	1	LOC_Os01g18180
Deletion	Chr12	12558453	12558472	19
Deletion	Chr8	12612774	12612775	1	LOC_Os08g21110
Deletion	Chr8	13184889	13184903	14
Deletion	Chr6	14304923	14304928	5
Deletion	Chr6	15600066	15600068	2
Deletion	Chr12	17268224	17268228	4
Deletion	Chr1	17404485	17404513	28
Deletion	Chr6	18790226	18790227	1	LOC_Os06g32270
Deletion	Chr12	18828448	18828449	1
Deletion	Chr5	20118886	20118890	4
Deletion	Chr6	21044331	21044334	3
Deletion	Chr3	22060001	22151000	90999	13
Deletion	Chr2	24563371	24563381	10
Deletion	Chr6	26432022	26432023	1
Deletion	Chr12	27236984	27236985	1
Deletion	Chr6	28027017	28027027	10

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	17306031	17306031	1
Insertion	Chr11	6083901	6083908	8
Insertion	Chr5	15870085	15870092	8
Insertion	Chr8	13996713	13996718	6
Insertion	Chr8	2626546	2626547	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	14928189	15055068
Inversion	Chr7	14928199	15055072
Inversion	Chr3	22063188	22189689	LOC_Os03g39920

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	13170888	Chr3	22942531
Translocation	Chr11	24445386	Chr4	29686988	2

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