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Mutant Information

Variant Information

Single base substitutions: 41

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	24780817	C-T	Homo
SBS	Chr1	24780818	G-T	Homo
SBS	Chr1	25039721	A-T	Homo
SBS	Chr2	12960704	T-A	HET
SBS	Chr2	13148658	T-A	HET
SBS	Chr3	8333292	C-T	HET
SBS	Chr3	14623960	A-G	HET
SBS	Chr3	14623961	A-G	HET
SBS	Chr3	32855410	G-A	Homo
SBS	Chr4	9894099	A-G	HET
SBS	Chr4	21228483	C-T	HET
SBS	Chr4	32477989	C-T	HET
SBS	Chr5	4500597	A-G	Homo
SBS	Chr5	11789843	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g20150
SBS	Chr5	15718935	T-G	Homo
SBS	Chr5	18309064	C-G	HET
SBS	Chr5	18644081	G-A	HET
SBS	Chr5	18644085	G-C	HET
SBS	Chr5	26515962	A-T	HET
SBS	Chr6	1401414	C-T	Homo
SBS	Chr6	3129535	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g06660
SBS	Chr6	13136836	C-T	Homo
SBS	Chr6	24905810	A-T	HET
SBS	Chr6	30557225	A-G	HET
SBS	Chr7	4578365	A-T	HET
SBS	Chr7	11802579	C-A	HET
SBS	Chr8	9695800	C-G	HET
SBS	Chr8	11519057	C-A	HET
SBS	Chr8	18378642	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g29910
SBS	Chr8	18378644	C-T	HET
SBS	Chr10	3077994	C-A	HET
SBS	Chr10	3077997	C-A	HET
SBS	Chr10	5622378	C-A	Homo
SBS	Chr10	9741432	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g19130
SBS	Chr10	16765084	C-A	HET
SBS	Chr10	18983050	C-T	HET
SBS	Chr11	7106183	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os11g12620
SBS	Chr11	12791473	G-A	HET
SBS	Chr11	15829795	G-A	HET
SBS	Chr11	19952878	C-A	HET
SBS	Chr12	12328883	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g21890

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	3225860	3225861	1
Deletion	Chr3	3274971	3274973	2
Deletion	Chr2	8692280	8692284	4
Deletion	Chr1	10687404	10687412	8	LOC_Os01g18900
Deletion	Chr6	13175661	13175664	3
Deletion	Chr6	13645515	13645697	182
Deletion	Chr8	14036590	14036597	7
Deletion	Chr3	15149139	15149140	1
Deletion	Chr7	15364921	15364936	15
Deletion	Chr12	15869030	15869031	1
Deletion	Chr5	16207401	16207409	8
Deletion	Chr9	17057336	17057353	17
Deletion	Chr10	19892001	19926000	33999	5
Deletion	Chr4	21940620	21940624	4
Deletion	Chr5	22724605	22724607	2
Deletion	Chr4	24857879	24857885	6
Deletion	Chr5	28392290	28392316	26	LOC_Os05g49520
Deletion	Chr5	28417930	28417931	1
Deletion	Chr6	30707722	30707725	3
Deletion	Chr3	33339248	33339263	15
Deletion	Chr1	37672103	37672106	3

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr7	264958	264959	2
Insertion	Chr2	9244220	9244227	8
Insertion	Chr3	16643399	16643402	4
Insertion	Chr6	9639783	9639826	44

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr9	7502025	7506855
Inversion	Chr9	9984420	10006910
Inversion	Chr2	27300222	27300615

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	5537862	Chr4	8208164
Translocation	Chr9	10006883	Chr5	18944866	2
Translocation	Chr9	10046746	Chr5	18944876	2

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