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Mutant Information

Variant Information

Single base substitutions: 40

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11755789	C-T	HET
SBS	Chr1	28014504	A-C	HET
SBS	Chr1	3107626	G-A	HET
SBS	Chr10	18581256	A-C	Homo
SBS	Chr10	1965424	G-A	HET
SBS	Chr10	22463614	C-T	Homo
SBS	Chr11	11159133	C-G	HET
SBS	Chr11	15247248	G-T	Homo
SBS	Chr11	19108003	G-A	HET
SBS	Chr12	25005644	G-T	HET
SBS	Chr12	6596931	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os12g12040
SBS	Chr12	8233157	C-A	HET
SBS	Chr12	8266637	C-G	HET
SBS	Chr2	12436184	G-A	HET
SBS	Chr2	23599789	T-A	Homo
SBS	Chr3	10935157	G-A	HET
SBS	Chr3	18818695	C-T	HET
SBS	Chr4	10140370	C-T	HET
SBS	Chr4	19950274	G-T	Homo
SBS	Chr4	2190161	C-T	HET
SBS	Chr4	27842885	G-A	HET
SBS	Chr4	31058884	G-T	HET
SBS	Chr4	34563303	T-A	Homo
SBS	Chr4	35225229	G-A	HET
SBS	Chr5	2523450	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g05180
SBS	Chr5	26950441	A-T	Homo
SBS	Chr5	6026598	A-T	Homo
SBS	Chr6	17600201	G-T	HET
SBS	Chr6	29569184	A-T	Homo
SBS	Chr7	10670537	T-G	HET
SBS	Chr7	21094369	G-A	HET
SBS	Chr7	6543338	C-T	HET
SBS	Chr7	6894587	C-T	HET
SBS	Chr7	9656252	T-C	HET
SBS	Chr8	17058634	G-T	HET
SBS	Chr8	25110796	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g39660
SBS	Chr8	26979584	C-T	HET
SBS	Chr8	5506317	G-T	HET
SBS	Chr8	5506318	A-T	HET
SBS	Chr9	20993603	G-C	Homo

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	1224855	1224860	5
Deletion	Chr4	2297001	2357000	59999	10
Deletion	Chr4	2366001	2432000	65999	9
Deletion	Chr4	2439001	2565000	125999	12
Deletion	Chr4	2579001	2631000	51999	12
Deletion	Chr4	2879001	3160000	280999	40
Deletion	Chr12	3623529	3623530	1
Deletion	Chr6	4644156	4644161	5
Deletion	Chr2	4910573	4910575	2	LOC_Os02g09530
Deletion	Chr8	5506595	5506611	16
Deletion	Chr3	6594694	6594695	1
Deletion	Chr6	7925310	7925317	7
Deletion	Chr2	9529083	9529088	5
Deletion	Chr7	11152621	11152629	8
Deletion	Chr4	12527738	12527749	11
Deletion	Chr12	12769483	12769489	6
Deletion	Chr1	12857540	12857548	8
Deletion	Chr2	15286055	15286058	3	LOC_Os02g26040
Deletion	Chr11	21516504	21516514	10
Deletion	Chr2	23783129	23783132	3
Deletion	Chr2	24011001	24028000	16999	LOC_Os02g39764
Deletion	Chr4	30257881	30257892	11	LOC_Os04g51090
Deletion	Chr1	41985001	42118000	132999	21

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	35770112	35770113	2
Insertion	Chr11	22787867	22787870	4
Insertion	Chr5	13786797	13786798	2

Inversions: 8

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	1448465	2300969	2
Inversion	Chr2	4100687	4606218	2
Inversion	Chr2	4100691	4606219	2
Inversion	Chr12	14999558	15127670	2
Inversion	Chr12	14999734	15127675	2
Inversion	Chr2	24010305	24027417	2
Inversion	Chr2	24027306	24027573	LOC_Os02g39764
Inversion	Chr11	27705538	27795824	2

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	7125535	Chr3	4034908
Translocation	Chr12	15231764	Chr2	34497276	2
Translocation	Chr12	15231800	Chr2	34494823	2
Translocation	Chr8	15935222	Chr7	6242257

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