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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	33779982	G-T	HET
SBS	Chr10	12427593	A-G	Homo
SBS	Chr10	19022184	G-A	Homo
SBS	Chr11	13418825	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g23740
SBS	Chr11	14448491	C-T	HET
SBS	Chr11	16071961	C-A	HET
SBS	Chr11	17815345	C-A	HET
SBS	Chr11	367989	C-A	HET
SBS	Chr12	17239702	C-G	HET
SBS	Chr12	24657397	G-A	Homo
SBS	Chr2	24183807	C-G	Homo
SBS	Chr2	27088884	G-A	Homo
SBS	Chr2	5069361	A-T	HET
SBS	Chr3	13816384	C-T	Homo
SBS	Chr3	3028611	C-T	HET
SBS	Chr3	4952193	T-C	HET
SBS	Chr4	10161613	T-A	HET
SBS	Chr4	11150609	G-T	HET
SBS	Chr4	26242004	A-G	Homo
SBS	Chr4	29464985	C-T	Homo
SBS	Chr4	6819793	T-G	HET
SBS	Chr5	17146693	T-C	HET
SBS	Chr5	17840811	C-A	Homo
SBS	Chr6	16000489	C-T	Homo
SBS	Chr6	26238325	A-G	Homo
SBS	Chr7	7853027	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g13680
SBS	Chr8	18837523	G-A	HET
SBS	Chr8	7295624	G-A	HET
SBS	Chr8	8460526	C-T	HET	STOP_GAINED	LOC_Os08g14170
SBS	Chr9	21195065	C-G	Homo

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	2034630	2034632	2
Deletion	Chr3	2355099	2355100	1
Deletion	Chr8	2560912	2560913	1	LOC_Os08g04990
Deletion	Chr10	6479811	6479812	1
Deletion	Chr8	11099869	11099870	1
Deletion	Chr10	14197207	14197210	3	LOC_Os10g26960
Deletion	Chr6	15224457	15224458	1
Deletion	Chr4	21179046	21179063	17	LOC_Os04g34880
Deletion	Chr11	25451001	25536000	84999	18
Deletion	Chr4	28172675	28172691	16
Deletion	Chr6	29706007	29706010	3	LOC_Os06g49010
Deletion	Chr3	31275058	31275059	1
Deletion	Chr3	32710784	32710792	8	LOC_Os03g57340
Deletion	Chr3	34231147	34231148	1	LOC_Os03g60180
Deletion	Chr1	43246914	43246915	1

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	27724750	27724815	66
Insertion	Chr11	9981486	9981486	1
Insertion	Chr3	15789344	15789345	2
Insertion	Chr4	7452431	7452431	1
Insertion	Chr5	17389648	17389667	20
Insertion	Chr8	18790086	18790086	1
Insertion	Chr8	5022341	5022343	3
Insertion	Chr9	319609	319610	2

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	6422573	6439345	LOC_Os05g11370
Inversion	Chr5	6422575	6439345	LOC_Os05g11370
Inversion	Chr3	14780116	15329520	2
Inversion	Chr3	14780131	15329533	2
Inversion	Chr10	20544859	20563641	LOC_Os10g38460
Inversion	Chr10	20544861	20563641	LOC_Os10g38460
Inversion	Chr6	22483291	22521118

Translocations: 16

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	4623844	Chr3	32491467
Translocation	Chr10	5539893	Chr4	17668408	2
Translocation	Chr7	6399891	Chr5	10232218
Translocation	Chr10	6618975	Chr6	13457533	2
Translocation	Chr6	7290184	Chr4	4507591
Translocation	Chr9	9725072	Chr6	8613918	2
Translocation	Chr5	14027495	Chr4	503956	2
Translocation	Chr8	17914979	Chr6	19132700
Translocation	Chr12	18521704	Chr9	1654382	LOC_Os12g30824
Translocation	Chr11	19619708	Chr4	2530360	2
Translocation	Chr11	21793133	Chr3	10130468
Translocation	Chr12	22916707	Chr2	23806513
Translocation	Chr5	23382598	Chr3	11740622
Translocation	Chr12	23667494	Chr1	14627764	2
Translocation	Chr4	24962093	Chr1	35969182	LOC_Os04g42160
Translocation	Chr8	27473648	Chr1	3092966	LOC_Os08g43430

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