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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11325125	G-A	HET
SBS	Chr1	13182412	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os01g23460
SBS	Chr1	13497630	G-A	HET
SBS	Chr1	22135484	A-G	HET
SBS	Chr1	26681075	G-T	HET
SBS	Chr1	37017537	C-A	HET
SBS	Chr1	41724814	G-C	Homo
SBS	Chr10	10150240	T-A	Homo
SBS	Chr10	20074557	A-T	Homo
SBS	Chr11	18560633	G-A	HET
SBS	Chr11	3683761	C-T	HET
SBS	Chr12	11482831	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os12g19700
SBS	Chr2	11298817	A-T	HET
SBS	Chr2	11298818	G-T	HET
SBS	Chr2	12431683	G-A	HET
SBS	Chr2	19511252	A-G	Homo
SBS	Chr2	20656125	G-A	Homo
SBS	Chr2	25409363	G-C	Homo
SBS	Chr3	19773192	G-T	Homo
SBS	Chr3	19773193	T-G	Homo
SBS	Chr4	2972111	A-T	Homo
SBS	Chr4	5355804	C-T	HET
SBS	Chr5	12894944	T-C	HET
SBS	Chr5	6988815	C-T	HET
SBS	Chr6	153959	C-T	Homo
SBS	Chr6	9734595	C-G	Homo
SBS	Chr7	14898580	T-C	Homo
SBS	Chr7	20923497	C-T	HET
SBS	Chr7	22326100	C-G	HET
SBS	Chr8	2624816	A-G	Homo

Deletions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	2246165	2246172	7
Deletion	Chr7	4186718	4186722	4
Deletion	Chr2	5982595	5982596	1
Deletion	Chr7	7677868	7677869	1
Deletion	Chr7	10071021	10071030	9	LOC_Os07g17140
Deletion	Chr6	10148788	10148791	3	LOC_Os06g17490
Deletion	Chr11	11128897	11128912	15
Deletion	Chr8	11367001	11500000	132999	19
Deletion	Chr8	13578759	13578760	1
Deletion	Chr7	14560068	14560077	9
Deletion	Chr5	16452214	16452246	32	LOC_Os05g28120
Deletion	Chr11	16519338	16519344	6
Deletion	Chr3	17411426	17411436	10
Deletion	Chr10	18981172	18981174	2
Deletion	Chr10	20837994	20838024	30
Deletion	Chr10	20858750	20858751	1
Deletion	Chr1	22134497	22134501	4
Deletion	Chr8	22499120	22499130	10
Deletion	Chr7	22639001	22689000	49999	7
Deletion	Chr8	22726711	22726720	9
Deletion	Chr2	23923001	23938000	14999
Deletion	Chr6	26638488	26638505	17
Deletion	Chr3	34059244	34059245	1	LOC_Os03g59810
Deletion	Chr1	41579563	41579572	9
Deletion	Chr1	41646115	41646117	2

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	29184762	29184763	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	389905	390850	LOC_Os03g01620
Inversion	Chr8	5147996	5315686	2
Inversion	Chr8	5149548	5315690	2

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr3	389528	Chr2	12572041	2
Translocation	Chr3	389923	Chr2	12572033	2
Translocation	Chr3	390851	Chr2	12572041	2
Translocation	Chr8	3228287	Chr5	28218490
Translocation	Chr8	3230970	Chr6	16851647
Translocation	Chr8	3231083	Chr5	28218484
Translocation	Chr8	5041061	Chr1	1889927	2
Translocation	Chr8	5041279	Chr1	1889895	2
Translocation	Chr9	9803322	Chr1	1889903	2
Translocation	Chr9	9803804	Chr8	5041278	LOC_Os09g16050

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