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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	13613325	C-T	HET
SBS	Chr1	17132446	G-C	HET
SBS	Chr1	24269987	G-A	HET
SBS	Chr1	37117047	G-A	HET
SBS	Chr1	38453771	C-A	HET
SBS	Chr1	40309661	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g69810
SBS	Chr10	19623453	C-T	HET
SBS	Chr10	7781187	G-A	HET
SBS	Chr10	9339654	T-C	Homo
SBS	Chr11	10158176	G-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g18070
SBS	Chr11	11538789	T-C	HET
SBS	Chr11	12890937	T-C	HET
SBS	Chr11	21240146	A-G	HET
SBS	Chr12	10109022	G-A	Homo
SBS	Chr2	15926629	G-C	HET
SBS	Chr2	23117170	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g38220
SBS	Chr2	23223413	G-T	HET
SBS	Chr2	29696029	C-T	HET
SBS	Chr2	34259468	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g55970
SBS	Chr3	20265407	G-A	HET
SBS	Chr3	27547311	T-C	HET
SBS	Chr3	28845139	G-C	HET
SBS	Chr3	6715595	G-A	HET
SBS	Chr4	14843758	G-A	HET
SBS	Chr4	31871009	C-T	HET
SBS	Chr4	35273511	T-C	Homo
SBS	Chr5	11807817	T-A	HET
SBS	Chr5	17480721	C-T	HET
SBS	Chr7	17696528	T-C	HET
SBS	Chr7	5205367	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g09770
SBS	Chr8	13547081	T-C	HET
SBS	Chr8	23344567	C-T	HET
SBS	Chr9	18605030	C-T	HET
SBS	Chr9	2399443	G-A	Homo

Deletions: 26

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1	19000	18999	4
Deletion	Chr6	89001	98000	8999	LOC_Os06g01090
Deletion	Chr3	614294	614296	2
Deletion	Chr5	1453916	1453920	4
Deletion	Chr11	1886689	1886712	23	LOC_Os11g04500
Deletion	Chr4	1945321	1945348	27	LOC_Os04g04180
Deletion	Chr9	2369161	2369164	3	LOC_Os09g04450
Deletion	Chr4	2571328	2571330	2	LOC_Os04g05160
Deletion	Chr7	5167348	5167355	7
Deletion	Chr7	7515001	7552000	36999	5
Deletion	Chr11	8039001	8173000	133999	23
Deletion	Chr11	8700001	8938000	237999	40
Deletion	Chr7	9697177	9697184	7
Deletion	Chr7	12476927	12476929	2
Deletion	Chr11	15312690	15312692	2
Deletion	Chr7	17390013	17390020	7
Deletion	Chr8	18540077	18540082	5	LOC_Os08g30140
Deletion	Chr1	19076205	19076206	1
Deletion	Chr11	19966001	19994000	27999	4
Deletion	Chr1	20216697	20216698	1	LOC_Os01g36420
Deletion	Chr4	22884585	22884588	3
Deletion	Chr4	27136649	27136651	2
Deletion	Chr5	27444179	27444194	15
Deletion	Chr3	28282564	28282575	11	LOC_Os03g49660
Deletion	Chr4	29673846	29673851	5
Deletion	Chr3	29727443	29727445	2

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	12528896	12528896	1
Insertion	Chr3	15780243	15780244	2
Insertion	Chr7	4450627	4450627	1
Insertion	Chr9	18149451	18149454	4

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	6571963	6857037
Inversion	Chr3	6571979	6857053

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	19929083	Chr4	26648533	2
Translocation	Chr11	19994200	Chr7	11068963	2
Translocation	Chr11	19995382	Chr7	11068962	2
Translocation	Chr11	22570691	Chr7	4765790	LOC_Os11g38050
Translocation	Chr5	24622183	Chr4	11340029

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